Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 PCDHA1-201ENST00000378133 2726 ntBASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 AL390719.1-204ENST00000412397 1219 ntBASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFAF3Q9BU61 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFAF3Q9BU61 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms