Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ITCHQ96J02 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ITCHQ96J02 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
ITCHQ96J02 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ITCHQ96J02 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ITCHQ96J02 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
ITCHQ96J02 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.57■□□□□ 0.4
ITCHQ96J02 AC073195.1-201ENST00000607241 877 ntBASIC17.57■□□□□ 0.4
ITCHQ96J02 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.57■□□□□ 0.4
ITCHQ96J02 AC106820.2-201ENST00000563775 3264 ntBASIC17.57■□□□□ 0.4
ITCHQ96J02 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ITCHQ96J02 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.57■□□□□ 0.4
ITCHQ96J02 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ITCHQ96J02 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ITCHQ96J02 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ITCHQ96J02 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ITCHQ96J02 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
ITCHQ96J02 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.57■□□□□ 0.4
ITCHQ96J02 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ITCHQ96J02 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.57■□□□□ 0.4
ITCHQ96J02 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
ITCHQ96J02 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ITCHQ96J02 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ITCHQ96J02 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ITCHQ96J02 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ITCHQ96J02 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.56■□□□□ 0.4
ITCHQ96J02 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.56■□□□□ 0.4
ITCHQ96J02 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.56■□□□□ 0.4
ITCHQ96J02 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 AP000593.1-201ENST00000393668 712 ntBASIC17.56■□□□□ 0.4
ITCHQ96J02 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
ITCHQ96J02 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.56■□□□□ 0.4
ITCHQ96J02 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.56■□□□□ 0.4
ITCHQ96J02 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.56■□□□□ 0.4
ITCHQ96J02 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ITCHQ96J02 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.56■□□□□ 0.4
ITCHQ96J02 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ITCHQ96J02 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.56■□□□□ 0.4
ITCHQ96J02 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITCHQ96J02 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.55■□□□□ 0.4
ITCHQ96J02 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ITCHQ96J02 GNAS-203ENST00000306120 1878 ntBASIC17.55■□□□□ 0.4
ITCHQ96J02 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ITCHQ96J02 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 AC011506.1-201ENST00000474329 610 ntBASIC17.55■□□□□ 0.4
ITCHQ96J02 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ITCHQ96J02 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.55■□□□□ 0.4
ITCHQ96J02 C1QBPP2-201ENST00000528754 825 ntBASIC17.55■□□□□ 0.4
ITCHQ96J02 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.55■□□□□ 0.4
ITCHQ96J02 AF186192.3-201ENST00000583427 947 ntBASIC17.55■□□□□ 0.4
ITCHQ96J02 MIR6786-201ENST00000616843 113 ntBASIC17.55■□□□□ 0.4
ITCHQ96J02 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.55■□□□□ 0.4
ITCHQ96J02 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITCHQ96J02 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITCHQ96J02 REXO1L9P-201ENST00000604264 2108 ntBASIC17.54■□□□□ 0.4
ITCHQ96J02 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITCHQ96J02 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITCHQ96J02 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITCHQ96J02 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITCHQ96J02 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITCHQ96J02 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ITCHQ96J02 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITCHQ96J02 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ITCHQ96J02 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ITCHQ96J02 MIR564-202ENST00000385049 94 ntBASIC17.54■□□□□ 0.4
ITCHQ96J02 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ITCHQ96J02 AC128676.1-201ENST00000454392 318 ntBASIC17.54■□□□□ 0.4
ITCHQ96J02 B3GAT3P1-201ENST00000471720 806 ntBASIC17.54■□□□□ 0.4
ITCHQ96J02 RARRES2P10-201ENST00000564312 460 ntBASIC17.54■□□□□ 0.4
ITCHQ96J02 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.54■□□□□ 0.4
ITCHQ96J02 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.54■□□□□ 0.4
ITCHQ96J02 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.54■□□□□ 0.4
ITCHQ96J02 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms