Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 TSPY5P-201ENST00000426936 936 ntBASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 HOMER2P1-201ENST00000455653 964 ntBASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 AC005082.1-201ENST00000413042 2259 ntBASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC148Q8NFR7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.2■□□□□ 0.99
CCDC148Q8NFR7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 AC104076.2-201ENST00000448912 469 ntBASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 AC090340.1-201ENST00000620778 4980 ntBASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC148Q8NFR7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 STARP1-201ENST00000397973 869 ntBASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 RASA4DP-201ENST00000460726 1199 ntBASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 AL157888.1-201ENST00000631930 593 ntBASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC148Q8NFR7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 AC092647.4-201ENST00000457211 535 ntBASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 DUX4L26-201ENST00000489078 1255 ntBASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 LINC01238-205ENST00000567549 1107 ntBASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC148Q8NFR7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms