Protein–RNA interactions for Protein: Q06787

FMR1, Synaptic functional regulator FMR1, humanhuman

Known RBP eCLIP

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1Q06787 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.958e-9■■□□□ 11.7
FMR1Q06787 DDX5-208ENST00000578491 463 ntTSL 210.57□□□□□ -0.722e-8■■□□□ 11.7
FMR1Q06787 DDX5-212ENST00000579461 814 ntTSL 37.9□□□□□ -1.142e-8■■□□□ 11.7
FMR1Q06787 DDX5-234ENST00000585317 923 ntTSL 25.48□□□□□ -1.532e-8■■□□□ 11.7
FMR1Q06787 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.44■■□□□ 1.826e-11■■□□□ 11.7
FMR1Q06787 KHDRBS1-201ENST00000307714 2738 ntTSL 1 (best)21.51■■□□□ 1.036e-11■■□□□ 11.7
FMR1Q06787 SF3B2-212ENST00000531589 616 ntTSL 216.7■□□□□ 0.266e-7■■□□□ 11.7
FMR1Q06787 MYC-204ENST00000520751 577 ntTSL 323.78■■□□□ 1.47e-7■■□□□ 11.7
FMR1Q06787 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.551e-6■■□□□ 11.6
FMR1Q06787 SF3A1-204ENST00000447376 418 ntTSL 520.13■□□□□ 0.812e-8■■□□□ 11.6
FMR1Q06787 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.18□□□□□ -1.422e-6■■□□□ 11.6
FMR1Q06787 IMPDH2-203ENST00000442157 865 ntTSL 211.99□□□□□ -0.491e-6■■□□□ 11.6
FMR1Q06787 DOT1L-209ENST00000608122 576 ntTSL 219.9■□□□□ 0.781e-6■■□□□ 11.6
FMR1Q06787 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.181e-6■■□□□ 11.6
FMR1Q06787 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.41e-6■■□□□ 11.6
FMR1Q06787 CAPN2-203ENST00000434648 577 ntTSL 516.21■□□□□ 0.191e-6■■□□□ 11.6
FMR1Q06787 CAPN2-202ENST00000433674 3264 ntTSL 2 BASIC11.67□□□□□ -0.541e-6■■□□□ 11.6
FMR1Q06787 SDHA-215ENST00000512962 935 ntTSL 316.78■□□□□ 0.282e-7■■□□□ 11.6
FMR1Q06787 ATP5B-211ENST00000553007 814 ntTSL 523.45■■□□□ 1.346e-19■■□□□ 11.6
FMR1Q06787 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.53■■□□□ 1.683e-7■■□□□ 11.6
FMR1Q06787 CHERP-204ENST00000546538 1429 ntTSL 1 (best)24.27■■□□□ 1.483e-10■■□□□ 11.6
FMR1Q06787 DNMT1-213ENST00000587604 513 ntTSL 218.38■□□□□ 0.538e-9■■□□□ 11.6
FMR1Q06787 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.393e-10■■□□□ 11.6
FMR1Q06787 CHERP-201ENST00000198939 4084 ntTSL 5 BASIC11.48□□□□□ -0.573e-10■■□□□ 11.6
FMR1Q06787 PI4KA-208ENST00000475414 400 ntTSL 59.31□□□□□ -0.921e-6■■□□□ 11.6
FMR1Q06787 PPP4R2-203ENST00000470976 1033 ntTSL 233.3■■■□□ 2.924e-6■■□□□ 11.6
FMR1Q06787 PPP4R2-205ENST00000482242 771 ntTSL 333.17■■■□□ 2.94e-6■■□□□ 11.6
FMR1Q06787 PPP4R2-206ENST00000488810 877 ntTSL 532.12■■■□□ 2.734e-6■■□□□ 11.6
FMR1Q06787 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.014e-6■■□□□ 11.6
FMR1Q06787 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.75□□□□□ -1.014e-6■■□□□ 11.6
FMR1Q06787 PPP4R2-204ENST00000476505 323 ntTSL 56.38□□□□□ -1.394e-6■■□□□ 11.6
FMR1Q06787 STIP1-208ENST00000540501 880 ntTSL 330.25■■■□□ 2.436e-8■■□□□ 11.6
FMR1Q06787 STK24-205ENST00000444574 1590 ntTSL 1 (best)16.16■□□□□ 0.183e-6■■□□□ 11.6
FMR1Q06787 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 03e-6■■□□□ 11.6
FMR1Q06787 MCM3AP-209ENST00000495475 199 ntTSL 314.63□□□□□ -0.073e-6■■□□□ 11.6
FMR1Q06787 NCAPD2-207ENST00000539084 4290 ntTSL 211.61□□□□□ -0.551e-6■■□□□ 11.6
FMR1Q06787 EZR-204ENST00000476189 956 ntTSL 315.69■□□□□ 0.14e-7■■□□□ 11.6
FMR1Q06787 STIM1-205ENST00000526156 1024 ntTSL 215.17■□□□□ 0.024e-6■■□□□ 11.5
FMR1Q06787 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.821e-7■■□□□ 11.5
FMR1Q06787 RFK-202ENST00000472900 753 ntTSL 322.34■■□□□ 1.174e-12■■□□□ 11.5
FMR1Q06787 RFK-204ENST00000479197 1501 ntTSL 1 (best)21.8■■□□□ 1.084e-12■■□□□ 11.5
FMR1Q06787 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.494e-12■■□□□ 11.5
FMR1Q06787 HNRNPM-205ENST00000596295 910 ntTSL 322.27■■□□□ 1.163e-8■■□□□ 11.5
FMR1Q06787 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.091e-6■■□□□ 11.5
FMR1Q06787 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.41e-6■■□□□ 11.5
FMR1Q06787 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.293e-21■■□□□ 11.5
FMR1Q06787 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.5■■□□□ 1.193e-21■■□□□ 11.5
FMR1Q06787 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.19■□□□□ 0.343e-21■■□□□ 11.5
FMR1Q06787 UBC-213ENST00000546120 718 ntTSL 5 BASIC11.34□□□□□ -0.593e-21■■□□□ 11.5
FMR1Q06787 DDX24-204ENST00000553451 486 ntTSL 35.45□□□□□ -1.542e-6■■□□□ 11.5
FMR1Q06787 EPRS-202ENST00000464052 770 ntTSL 29.49□□□□□ -0.891e-8■■□□□ 11.5
FMR1Q06787 LMNA-222ENST00000508500 848 ntTSL 1 (best)20.86■□□□□ 0.936e-10■■□□□ 11.5
FMR1Q06787 UBC-208ENST00000540700 627 ntTSL 221.03■□□□□ 0.961e-25■■□□□ 11.5
FMR1Q06787 UBC-203ENST00000535859 582 ntTSL 216.32■□□□□ 0.21e-25■■□□□ 11.5
FMR1Q06787 UBC-214ENST00000546271 559 ntTSL 415.12■□□□□ 0.011e-25■■□□□ 11.5
FMR1Q06787 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.312e-6■■□□□ 11.5
FMR1Q06787 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.77□□□□□ -1.162e-6■■□□□ 11.5
FMR1Q06787 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.339e-7■■□□□ 11.5
FMR1Q06787 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.485e-7■■□□□ 11.5
FMR1Q06787 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.814e-7■■□□□ 11.5
FMR1Q06787 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.354e-7■■□□□ 11.5
FMR1Q06787 EP400-208ENST00000611841 3129 ntTSL 513.02□□□□□ -0.323e-7■■□□□ 11.5
FMR1Q06787 TP53BP2-205ENST00000465119 465 ntTSL 530.23■■■□□ 2.433e-9■■□□□ 11.4
FMR1Q06787 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.32■■□□□ 1.644e-6■■□□□ 11.4
FMR1Q06787 JUP-212ENST00000591690 583 ntTSL 322.96■■□□□ 1.272e-12■■□□□ 11.4
FMR1Q06787 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.4■□□□□ 0.863e-9■■□□□ 11.4
FMR1Q06787 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.773e-9■■□□□ 11.4
FMR1Q06787 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.72■□□□□ 0.754e-6■■□□□ 11.4
FMR1Q06787 TP53BP2-206ENST00000472180 467 ntTSL 217.51■□□□□ 0.393e-9■■□□□ 11.4
FMR1Q06787 JUP-211ENST00000589036 566 ntTSL 417.14■□□□□ 0.332e-12■■□□□ 11.4
FMR1Q06787 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.054e-6■■□□□ 11.4
FMR1Q06787 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC14.45□□□□□ -0.14e-6■■□□□ 11.4
FMR1Q06787 GLUL-207ENST00000463851 939 ntTSL 312.09□□□□□ -0.474e-16■■□□□ 11.4
FMR1Q06787 GLUL-209ENST00000480604 908 ntTSL 510.12□□□□□ -0.794e-16■■□□□ 11.4
FMR1Q06787 STAG2-212ENST00000458176 845 ntTSL 317.63■□□□□ 0.418e-9■■□□□ 11.4
FMR1Q06787 ATP5B-210ENST00000552959 1085 ntTSL 324.64■■□□□ 1.546e-19■■□□□ 11.4
FMR1Q06787 ALDOC-205ENST00000460201 922 ntTSL 217.37■□□□□ 0.372e-18■■□□□ 11.4
FMR1Q06787 ALDOC-206ENST00000578590 839 ntTSL 413.15□□□□□ -0.32e-18■■□□□ 11.4
FMR1Q06787 ALDOC-204ENST00000435638 579 ntTSL 312.63□□□□□ -0.392e-18■■□□□ 11.4
FMR1Q06787 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.176e-7■■□□□ 11.4
FMR1Q06787 MYC-203ENST00000517291 1023 ntTSL 1 (best)18.97■□□□□ 0.638e-7■■□□□ 11.4
FMR1Q06787 CXXC5-206ENST00000504844 777 ntTSL 226.93■■□□□ 1.91e-6■■□□□ 11.4
FMR1Q06787 CXXC5-203ENST00000502336 581 ntTSL 425.38■■□□□ 1.651e-6■■□□□ 11.4
FMR1Q06787 CXXC5-212ENST00000511457 810 ntTSL 320.86■□□□□ 0.931e-6■■□□□ 11.4
FMR1Q06787 CXXC5-205ENST00000503511 506 ntTSL 220.36■□□□□ 0.851e-6■■□□□ 11.4
FMR1Q06787 CXXC5-210ENST00000509238 542 ntTSL 220.36■□□□□ 0.851e-6■■□□□ 11.4
FMR1Q06787 CXXC5-216ENST00000520967 878 ntTSL 319.99■□□□□ 0.791e-6■■□□□ 11.4
FMR1Q06787 CXXC5-204ENST00000502716 900 ntTSL 219.24■□□□□ 0.671e-6■■□□□ 11.4
FMR1Q06787 CXXC5-207ENST00000504944 568 ntTSL 317.75■□□□□ 0.431e-6■■□□□ 11.4
FMR1Q06787 NDUFS1-209ENST00000457011 2171 ntTSL 2 BASIC11.41□□□□□ -0.583e-6■■□□□ 11.4
FMR1Q06787 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC11□□□□□ -0.653e-6■■□□□ 11.4
FMR1Q06787 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC10.97□□□□□ -0.653e-6■■□□□ 11.4
FMR1Q06787 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC9.09□□□□□ -0.953e-6■■□□□ 11.4
FMR1Q06787 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.343e-6■■□□□ 11.4
FMR1Q06787 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.143e-8■■□□□ 11.4
FMR1Q06787 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.12■■□□□ 1.933e-8■■□□□ 11.4
FMR1Q06787 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)27.05■■□□□ 1.923e-8■■□□□ 11.4
FMR1Q06787 SNRNP70-209ENST00000601065 1757 ntTSL 325.73■■□□□ 1.713e-8■■□□□ 11.4
FMR1Q06787 SNRNP70-205ENST00000597936 580 ntTSL 223.71■■□□□ 1.393e-8■■□□□ 11.4
FMR1Q06787 SNRNP70-207ENST00000598984 547 ntTSL 522.9■■□□□ 1.263e-8■■□□□ 11.4
Retrieved 100 of 13,491 protein–RNA pairs in 68.8 ms