Protein–RNA interactions for Protein: P12036

NEFH, Neurofilament heavy polypeptide, humanhuman

Predictions only

Length 1,026 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP12036 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEFHP12036 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEFHP12036 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEFHP12036 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.7■□□□□ 0.58
NEFHP12036 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEFHP12036 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEFHP12036 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NEFHP12036 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NEFHP12036 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEFHP12036 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEFHP12036 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEFHP12036 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEFHP12036 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEFHP12036 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.69■□□□□ 0.58
NEFHP12036 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.69■□□□□ 0.58
NEFHP12036 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.69■□□□□ 0.58
NEFHP12036 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.69■□□□□ 0.58
NEFHP12036 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.69■□□□□ 0.58
NEFHP12036 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NEFHP12036 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.69■□□□□ 0.58
NEFHP12036 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.69■□□□□ 0.58
NEFHP12036 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.69■□□□□ 0.58
NEFHP12036 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.69■□□□□ 0.58
NEFHP12036 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.69■□□□□ 0.58
NEFHP12036 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEFHP12036 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
NEFHP12036 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NEFHP12036 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.68■□□□□ 0.58
NEFHP12036 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
NEFHP12036 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
NEFHP12036 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NEFHP12036 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NEFHP12036 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 AL513477.1-201ENST00000602865 2407 ntBASIC18.68■□□□□ 0.58
NEFHP12036 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NEFHP12036 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.68■□□□□ 0.58
NEFHP12036 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.68■□□□□ 0.58
NEFHP12036 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.68■□□□□ 0.58
NEFHP12036 MIR4758-201ENST00000577688 71 ntBASIC18.68■□□□□ 0.58
NEFHP12036 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.68■□□□□ 0.58
NEFHP12036 HLA-B-256ENST00000639848 1089 ntBASIC18.68■□□□□ 0.58
NEFHP12036 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 AC008764.6-201ENST00000595909 2069 ntBASIC18.68■□□□□ 0.58
NEFHP12036 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.68■□□□□ 0.58
NEFHP12036 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEFHP12036 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NEFHP12036 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.67■□□□□ 0.58
NEFHP12036 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.67■□□□□ 0.58
NEFHP12036 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NEFHP12036 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NEFHP12036 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.67■□□□□ 0.58
NEFHP12036 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEFHP12036 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.67■□□□□ 0.58
NEFHP12036 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.67■□□□□ 0.58
NEFHP12036 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms