Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.92■□□□□ 0.46
HOXC4P09017 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.92■□□□□ 0.46
HOXC4P09017 AL691432.3-201ENST00000621860 400 ntBASIC17.92■□□□□ 0.46
HOXC4P09017 AC012313.10-201ENST00000623509 926 ntBASIC17.92■□□□□ 0.46
HOXC4P09017 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.92■□□□□ 0.46
HOXC4P09017 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXC4P09017 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC4P09017 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC4P09017 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXC4P09017 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXC4P09017 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.92■□□□□ 0.46
HOXC4P09017 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXC4P09017 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXC4P09017 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC4P09017 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HOXC4P09017 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC4P09017 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HOXC4P09017 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC4P09017 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC4P09017 AL845331.1-201ENST00000424978 1190 ntBASIC17.91■□□□□ 0.46
HOXC4P09017 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXC4P09017 AL121772.3-201ENST00000610840 674 ntBASIC17.91■□□□□ 0.46
HOXC4P09017 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXC4P09017 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HOXC4P09017 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC4P09017 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HOXC4P09017 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC4P09017 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC4P09017 GMCL1P1-201ENST00000463439 1581 ntBASIC17.91■□□□□ 0.46
HOXC4P09017 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC4P09017 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC4P09017 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC4P09017 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC4P09017 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
HOXC4P09017 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC4P09017 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC4P09017 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC4P09017 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HOXC4P09017 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 TPM4P1-201ENST00000436100 807 ntBASIC17.9■□□□□ 0.46
HOXC4P09017 AC068472.1-201ENST00000474589 881 ntBASIC17.9■□□□□ 0.46
HOXC4P09017 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXC4P09017 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC4P09017 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXC4P09017 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXC4P09017 AC074051.2-201ENST00000565115 352 ntBASIC17.9■□□□□ 0.46
HOXC4P09017 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC4P09017 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.9■□□□□ 0.46
HOXC4P09017 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC4P09017 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
HOXC4P09017 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HOXC4P09017 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HOXC4P09017 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HOXC4P09017 AC073592.3-201ENST00000625118 1834 ntBASIC17.9■□□□□ 0.46
HOXC4P09017 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC4P09017 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC4P09017 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
HOXC4P09017 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
HOXC4P09017 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC4P09017 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC4P09017 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC4P09017 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC4P09017 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HOXC4P09017 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
HOXC4P09017 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC4P09017 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC4P09017 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC4P09017 KRT18P65-201ENST00000439811 1286 ntBASIC17.89■□□□□ 0.45
HOXC4P09017 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC4P09017 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC4P09017 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC4P09017 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HOXC4P09017 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HOXC4P09017 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC4P09017 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HOXC4P09017 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC4P09017 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HOXC4P09017 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC4P09017 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms