Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
MKRN1Q9UHC7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
MKRN1Q9UHC7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC30.5■■■□□ 2.47
MKRN1Q9UHC7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
MKRN1Q9UHC7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.5■■■□□ 2.47
MKRN1Q9UHC7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.5■■■□□ 2.47
MKRN1Q9UHC7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
MKRN1Q9UHC7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
MKRN1Q9UHC7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
MKRN1Q9UHC7 AL592293.1-201ENST00000502889 1188 ntBASIC30.49■■■□□ 2.47
MKRN1Q9UHC7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.49■■■□□ 2.47
MKRN1Q9UHC7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
MKRN1Q9UHC7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
MKRN1Q9UHC7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
MKRN1Q9UHC7 AC148477.6-201ENST00000623746 465 ntBASIC30.48■■■□□ 2.47
MKRN1Q9UHC7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
MKRN1Q9UHC7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
MKRN1Q9UHC7 AL139393.2-201ENST00000608721 2025 ntBASIC30.47■■■□□ 2.47
MKRN1Q9UHC7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
MKRN1Q9UHC7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
MKRN1Q9UHC7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.46■■■□□ 2.47
MKRN1Q9UHC7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
MKRN1Q9UHC7 GUSBP5-201ENST00000418136 578 ntBASIC30.46■■■□□ 2.47
MKRN1Q9UHC7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
MKRN1Q9UHC7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
MKRN1Q9UHC7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
MKRN1Q9UHC7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
MKRN1Q9UHC7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.45■■■□□ 2.46
MKRN1Q9UHC7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
MKRN1Q9UHC7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
MKRN1Q9UHC7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.44■■■□□ 2.46
MKRN1Q9UHC7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
MKRN1Q9UHC7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
MKRN1Q9UHC7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.44■■■□□ 2.46
MKRN1Q9UHC7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.43■■■□□ 2.46
MKRN1Q9UHC7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
MKRN1Q9UHC7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
MKRN1Q9UHC7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
MKRN1Q9UHC7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
MKRN1Q9UHC7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 AC100797.4-201ENST00000631653 1827 ntBASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 RP9P-202ENST00000450133 1212 ntBASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 AC025884.2-201ENST00000553429 711 ntBASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 AC010980.1-201ENST00000587192 1142 ntBASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
MKRN1Q9UHC7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
MKRN1Q9UHC7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.4■■■□□ 2.46
MKRN1Q9UHC7 BHLHE23-202ENST00000612929 1109 ntBASIC30.4■■■□□ 2.46
MKRN1Q9UHC7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
MKRN1Q9UHC7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
MKRN1Q9UHC7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
MKRN1Q9UHC7 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.39■■■□□ 2.46
MKRN1Q9UHC7 AC133552.2-201ENST00000619106 1032 ntBASIC30.39■■■□□ 2.46
MKRN1Q9UHC7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.39■■■□□ 2.46
MKRN1Q9UHC7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
MKRN1Q9UHC7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.45
MKRN1Q9UHC7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
MKRN1Q9UHC7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
MKRN1Q9UHC7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.38■■■□□ 2.45
MKRN1Q9UHC7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
MKRN1Q9UHC7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.38■■■□□ 2.45
MKRN1Q9UHC7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
MKRN1Q9UHC7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
MKRN1Q9UHC7 AC009831.1-201ENST00000580420 1582 ntBASIC30.37■■■□□ 2.45
MKRN1Q9UHC7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MKRN1Q9UHC7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MKRN1Q9UHC7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MKRN1Q9UHC7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.35■■■□□ 2.45
MKRN1Q9UHC7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
MKRN1Q9UHC7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
MKRN1Q9UHC7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.35■■■□□ 2.45
MKRN1Q9UHC7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.34■■■□□ 2.45
MKRN1Q9UHC7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
MKRN1Q9UHC7 MIR219A2-201ENST00000608502 1504 ntBASIC30.34■■■□□ 2.45
MKRN1Q9UHC7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.34■■■□□ 2.45
MKRN1Q9UHC7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
MKRN1Q9UHC7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
MKRN1Q9UHC7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
MKRN1Q9UHC7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.33■■■□□ 2.45
MKRN1Q9UHC7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
MKRN1Q9UHC7 AL356441.2-201ENST00000443009 864 ntBASIC30.32■■■□□ 2.44
MKRN1Q9UHC7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.32■■■□□ 2.44
MKRN1Q9UHC7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.31■■■□□ 2.44
MKRN1Q9UHC7 AC007029.1-201ENST00000604183 313 ntBASIC30.31■■■□□ 2.44
MKRN1Q9UHC7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
MKRN1Q9UHC7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
MKRN1Q9UHC7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.3■■■□□ 2.44
MKRN1Q9UHC7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
MKRN1Q9UHC7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
MKRN1Q9UHC7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
MKRN1Q9UHC7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.29■■■□□ 2.44
MKRN1Q9UHC7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms