Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC41.33■■■■■ 4.21
RIMBP3Q9UFD9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC41.31■■■■■ 4.2
RIMBP3Q9UFD9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC41.31■■■■■ 4.2
RIMBP3Q9UFD9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC41.31■■■■■ 4.2
RIMBP3Q9UFD9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC41.31■■■■■ 4.2
RIMBP3Q9UFD9 RARRES2P6-201ENST00000567333 442 ntBASIC41.31■■■■■ 4.2
RIMBP3Q9UFD9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
RIMBP3Q9UFD9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC41.3■■■■■ 4.2
RIMBP3Q9UFD9 HYI-210ENST00000486909 905 ntTSL 5 BASIC41.29■■■■■ 4.2
RIMBP3Q9UFD9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC41.29■■■■■ 4.2
RIMBP3Q9UFD9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC41.29■■■■■ 4.2
RIMBP3Q9UFD9 AC010864.1-201ENST00000609407 1511 ntBASIC41.28■■■■■ 4.2
RIMBP3Q9UFD9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC41.28■■■■■ 4.2
RIMBP3Q9UFD9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC41.27■■■■■ 4.2
RIMBP3Q9UFD9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC41.27■■■■■ 4.2
RIMBP3Q9UFD9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC41.27■■■■■ 4.2
RIMBP3Q9UFD9 Z92544.1-202ENST00000571933 1220 ntBASIC41.26■■■■■ 4.2
RIMBP3Q9UFD9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC41.26■■■■■ 4.19
RIMBP3Q9UFD9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC41.26■■■■■ 4.19
RIMBP3Q9UFD9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC41.25■■■■■ 4.19
RIMBP3Q9UFD9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC41.24■■■■■ 4.19
RIMBP3Q9UFD9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC41.24■■■■■ 4.19
RIMBP3Q9UFD9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC41.24■■■■■ 4.19
RIMBP3Q9UFD9 AC093536.1-201ENST00000569153 554 ntBASIC41.24■■■■■ 4.19
RIMBP3Q9UFD9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC41.23■■■■■ 4.19
RIMBP3Q9UFD9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC41.22■■■■■ 4.19
RIMBP3Q9UFD9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC41.21■■■■■ 4.19
RIMBP3Q9UFD9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC41.21■■■■■ 4.19
RIMBP3Q9UFD9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
RIMBP3Q9UFD9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC41.21■■■■■ 4.19
RIMBP3Q9UFD9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC41.2■■■■■ 4.19
RIMBP3Q9UFD9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC41.2■■■■■ 4.19
RIMBP3Q9UFD9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC41.2■■■■■ 4.19
RIMBP3Q9UFD9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC41.2■■■■■ 4.19
RIMBP3Q9UFD9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
RIMBP3Q9UFD9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC41.17■■■■■ 4.18
RIMBP3Q9UFD9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC41.17■■■■■ 4.18
RIMBP3Q9UFD9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC41.16■■■■■ 4.18
RIMBP3Q9UFD9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC41.16■■■■■ 4.18
RIMBP3Q9UFD9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC41.15■■■■■ 4.18
RIMBP3Q9UFD9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC41.15■■■■■ 4.18
RIMBP3Q9UFD9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC41.14■■■■■ 4.18
RIMBP3Q9UFD9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC41.13■■■■■ 4.18
RIMBP3Q9UFD9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC41.13■■■■■ 4.17
RIMBP3Q9UFD9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.17
RIMBP3Q9UFD9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC41.12■■■■■ 4.17
RIMBP3Q9UFD9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC41.11■■■■■ 4.17
RIMBP3Q9UFD9 AC131281.2-201ENST00000520478 145 ntBASIC41.11■■■■■ 4.17
RIMBP3Q9UFD9 AC104564.3-201ENST00000582367 638 ntBASIC41.11■■■■■ 4.17
RIMBP3Q9UFD9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC41.1■■■■■ 4.17
RIMBP3Q9UFD9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC41.09■■■■■ 4.17
RIMBP3Q9UFD9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC41.09■■■■■ 4.17
RIMBP3Q9UFD9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC41.09■■■■■ 4.17
RIMBP3Q9UFD9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC41.08■■■■■ 4.17
RIMBP3Q9UFD9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
RIMBP3Q9UFD9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC41.08■■■■■ 4.17
RIMBP3Q9UFD9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC41.08■■■■■ 4.17
RIMBP3Q9UFD9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC41.08■■■■■ 4.17
RIMBP3Q9UFD9 AC110285.6-201ENST00000617652 491 ntBASIC41.07■■■■■ 4.17
RIMBP3Q9UFD9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC41.07■■■■■ 4.17
RIMBP3Q9UFD9 AC120057.4-201ENST00000624722 1615 ntBASIC41.07■■■■■ 4.16
RIMBP3Q9UFD9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC41.07■■■■■ 4.16
RIMBP3Q9UFD9 UNC93B8-201ENST00000511903 705 ntBASIC41.07■■■■■ 4.16
RIMBP3Q9UFD9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC41.06■■■■■ 4.16
RIMBP3Q9UFD9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC41.06■■■■■ 4.16
RIMBP3Q9UFD9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC41.06■■■■■ 4.16
RIMBP3Q9UFD9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC41.05■■■■■ 4.16
RIMBP3Q9UFD9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC41.05■■■■■ 4.16
RIMBP3Q9UFD9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC41.05■■■■■ 4.16
RIMBP3Q9UFD9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC41.04■■■■■ 4.16
RIMBP3Q9UFD9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC41.04■■■■■ 4.16
RIMBP3Q9UFD9 KRT16P3-201ENST00000439127 1283 ntBASIC41.04■■■■■ 4.16
RIMBP3Q9UFD9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC41.03■■■■■ 4.16
RIMBP3Q9UFD9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC41.03■■■■■ 4.16
RIMBP3Q9UFD9 AC127502.1-201ENST00000399971 1502 ntBASIC41.02■■■■■ 4.16
RIMBP3Q9UFD9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC41.01■■■■■ 4.16
RIMBP3Q9UFD9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC41.01■■■■■ 4.16
RIMBP3Q9UFD9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC41■■■■■ 4.15
RIMBP3Q9UFD9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC41■■■■■ 4.15
RIMBP3Q9UFD9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC41■■■■■ 4.15
RIMBP3Q9UFD9 AC026271.2-201ENST00000428091 497 ntBASIC41■■■■■ 4.15
RIMBP3Q9UFD9 LONRF2P2-201ENST00000439212 571 ntBASIC41■■■■■ 4.15
RIMBP3Q9UFD9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC41■■■■■ 4.15
RIMBP3Q9UFD9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC41■■■■■ 4.15
RIMBP3Q9UFD9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC40.99■■■■■ 4.15
RIMBP3Q9UFD9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC40.98■■■■■ 4.15
RIMBP3Q9UFD9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC40.98■■■■■ 4.15
RIMBP3Q9UFD9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC40.98■■■■■ 4.15
RIMBP3Q9UFD9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC40.97■■■■■ 4.15
RIMBP3Q9UFD9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC40.97■■■■■ 4.15
RIMBP3Q9UFD9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC40.97■■■■■ 4.15
RIMBP3Q9UFD9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC40.97■■■■■ 4.15
RIMBP3Q9UFD9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC40.96■■■■■ 4.15
RIMBP3Q9UFD9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC40.96■■■■■ 4.15
RIMBP3Q9UFD9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC40.96■■■■■ 4.15
RIMBP3Q9UFD9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC40.96■■■■■ 4.15
RIMBP3Q9UFD9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC40.95■■■■■ 4.15
RIMBP3Q9UFD9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC40.95■■■■■ 4.15
RIMBP3Q9UFD9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC40.95■■■■■ 4.15
RIMBP3Q9UFD9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC40.95■■■■■ 4.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms