Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.79■■□□□ 1.72
KDM4CQ9H3R0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
KDM4CQ9H3R0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KDM4CQ9H3R0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KDM4CQ9H3R0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.79■■□□□ 1.72
KDM4CQ9H3R0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KDM4CQ9H3R0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
KDM4CQ9H3R0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KDM4CQ9H3R0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
KDM4CQ9H3R0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KDM4CQ9H3R0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KDM4CQ9H3R0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KDM4CQ9H3R0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
KDM4CQ9H3R0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.78■■□□□ 1.72
KDM4CQ9H3R0 WHAMMP2-203ENST00000563942 1603 ntBASIC25.77■■□□□ 1.72
KDM4CQ9H3R0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.77■■□□□ 1.72
KDM4CQ9H3R0 AC008813.1-201ENST00000536597 885 ntBASIC25.77■■□□□ 1.72
KDM4CQ9H3R0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
KDM4CQ9H3R0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
KDM4CQ9H3R0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.76■■□□□ 1.71
KDM4CQ9H3R0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.76■■□□□ 1.71
KDM4CQ9H3R0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
KDM4CQ9H3R0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
KDM4CQ9H3R0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KDM4CQ9H3R0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.74■■□□□ 1.71
KDM4CQ9H3R0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
KDM4CQ9H3R0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
KDM4CQ9H3R0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
KDM4CQ9H3R0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
KDM4CQ9H3R0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.73■■□□□ 1.71
KDM4CQ9H3R0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
KDM4CQ9H3R0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
KDM4CQ9H3R0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.73■■□□□ 1.71
KDM4CQ9H3R0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.73■■□□□ 1.71
KDM4CQ9H3R0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
KDM4CQ9H3R0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
KDM4CQ9H3R0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
KDM4CQ9H3R0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
KDM4CQ9H3R0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.72■■□□□ 1.71
KDM4CQ9H3R0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
KDM4CQ9H3R0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
KDM4CQ9H3R0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
KDM4CQ9H3R0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.71■■□□□ 1.71
KDM4CQ9H3R0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.71■■□□□ 1.71
KDM4CQ9H3R0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
KDM4CQ9H3R0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
KDM4CQ9H3R0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
KDM4CQ9H3R0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
KDM4CQ9H3R0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
KDM4CQ9H3R0 BX255925.1-201ENST00000566954 1854 ntBASIC25.69■■□□□ 1.7
KDM4CQ9H3R0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.69■■□□□ 1.7
KDM4CQ9H3R0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM4CQ9H3R0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.68■■□□□ 1.7
KDM4CQ9H3R0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.68■■□□□ 1.7
KDM4CQ9H3R0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.68■■□□□ 1.7
KDM4CQ9H3R0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.68■■□□□ 1.7
KDM4CQ9H3R0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.68■■□□□ 1.7
KDM4CQ9H3R0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
KDM4CQ9H3R0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
KDM4CQ9H3R0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
KDM4CQ9H3R0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.68■■□□□ 1.7
KDM4CQ9H3R0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM4CQ9H3R0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
KDM4CQ9H3R0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM4CQ9H3R0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM4CQ9H3R0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM4CQ9H3R0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
KDM4CQ9H3R0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM4CQ9H3R0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.64■■□□□ 1.7
KDM4CQ9H3R0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
KDM4CQ9H3R0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
KDM4CQ9H3R0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.64■■□□□ 1.69
KDM4CQ9H3R0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
KDM4CQ9H3R0 AC110285.7-201ENST00000624417 1536 ntBASIC25.63■■□□□ 1.69
KDM4CQ9H3R0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
KDM4CQ9H3R0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
KDM4CQ9H3R0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
KDM4CQ9H3R0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.62■■□□□ 1.69
KDM4CQ9H3R0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
KDM4CQ9H3R0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
KDM4CQ9H3R0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
KDM4CQ9H3R0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
KDM4CQ9H3R0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
KDM4CQ9H3R0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
KDM4CQ9H3R0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
KDM4CQ9H3R0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
KDM4CQ9H3R0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.6■■□□□ 1.69
KDM4CQ9H3R0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
KDM4CQ9H3R0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.6■■□□□ 1.69
KDM4CQ9H3R0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
KDM4CQ9H3R0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
KDM4CQ9H3R0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
KDM4CQ9H3R0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
KDM4CQ9H3R0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.6■■□□□ 1.69
KDM4CQ9H3R0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
KDM4CQ9H3R0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
KDM4CQ9H3R0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.59■■□□□ 1.69
KDM4CQ9H3R0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.59■■□□□ 1.69
KDM4CQ9H3R0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
KDM4CQ9H3R0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms