Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HDHD3Q9BSH5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.98■□□□□ 0.95
HDHD3Q9BSH5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDHD3Q9BSH5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HDHD3Q9BSH5 MIR3665-201ENST00000578708 105 ntBASIC20.98■□□□□ 0.95
HDHD3Q9BSH5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.98■□□□□ 0.95
HDHD3Q9BSH5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDHD3Q9BSH5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDHD3Q9BSH5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.97■□□□□ 0.95
HDHD3Q9BSH5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HDHD3Q9BSH5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDHD3Q9BSH5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.96■□□□□ 0.95
HDHD3Q9BSH5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDHD3Q9BSH5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDHD3Q9BSH5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.95■□□□□ 0.94
HDHD3Q9BSH5 AC145676.1-201ENST00000514988 2004 ntBASIC20.95■□□□□ 0.94
HDHD3Q9BSH5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDHD3Q9BSH5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HDHD3Q9BSH5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.94■□□□□ 0.94
HDHD3Q9BSH5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.94■□□□□ 0.94
HDHD3Q9BSH5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HDHD3Q9BSH5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.94■□□□□ 0.94
HDHD3Q9BSH5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.94■□□□□ 0.94
HDHD3Q9BSH5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HDHD3Q9BSH5 AP004609.3-201ENST00000610705 1884 ntBASIC20.94■□□□□ 0.94
HDHD3Q9BSH5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.93■□□□□ 0.94
HDHD3Q9BSH5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.93■□□□□ 0.94
HDHD3Q9BSH5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDHD3Q9BSH5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDHD3Q9BSH5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDHD3Q9BSH5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDHD3Q9BSH5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDHD3Q9BSH5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDHD3Q9BSH5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDHD3Q9BSH5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDHD3Q9BSH5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HDHD3Q9BSH5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.91■□□□□ 0.94
HDHD3Q9BSH5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.91■□□□□ 0.94
HDHD3Q9BSH5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDHD3Q9BSH5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.9■□□□□ 0.94
HDHD3Q9BSH5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.9■□□□□ 0.94
HDHD3Q9BSH5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HDHD3Q9BSH5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.89■□□□□ 0.93
HDHD3Q9BSH5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDHD3Q9BSH5 AC087741.3-201ENST00000624270 1347 ntBASIC20.89■□□□□ 0.93
HDHD3Q9BSH5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HDHD3Q9BSH5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDHD3Q9BSH5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.89■□□□□ 0.93
HDHD3Q9BSH5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDHD3Q9BSH5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDHD3Q9BSH5 AC020928.2-201ENST00000588717 2197 ntBASIC20.89■□□□□ 0.93
HDHD3Q9BSH5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDHD3Q9BSH5 AC110285.7-201ENST00000624417 1536 ntBASIC20.88■□□□□ 0.93
HDHD3Q9BSH5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDHD3Q9BSH5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.88■□□□□ 0.93
HDHD3Q9BSH5 AP006261.1-201ENST00000584783 668 ntBASIC20.88■□□□□ 0.93
HDHD3Q9BSH5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDHD3Q9BSH5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.87■□□□□ 0.93
HDHD3Q9BSH5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HDHD3Q9BSH5 AC092803.2-201ENST00000564287 1899 ntBASIC20.86■□□□□ 0.93
HDHD3Q9BSH5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDHD3Q9BSH5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.86■□□□□ 0.93
HDHD3Q9BSH5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.86■□□□□ 0.93
HDHD3Q9BSH5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDHD3Q9BSH5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.86■□□□□ 0.93
HDHD3Q9BSH5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.86■□□□□ 0.93
HDHD3Q9BSH5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDHD3Q9BSH5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HDHD3Q9BSH5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDHD3Q9BSH5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HDHD3Q9BSH5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HDHD3Q9BSH5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.84■□□□□ 0.93
HDHD3Q9BSH5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HDHD3Q9BSH5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HDHD3Q9BSH5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.84■□□□□ 0.93
HDHD3Q9BSH5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HDHD3Q9BSH5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.83■□□□□ 0.93
HDHD3Q9BSH5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HDHD3Q9BSH5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.83■□□□□ 0.93
HDHD3Q9BSH5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HDHD3Q9BSH5 AL162393.1-201ENST00000437852 946 ntBASIC20.83■□□□□ 0.93
HDHD3Q9BSH5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HDHD3Q9BSH5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
HDHD3Q9BSH5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HDHD3Q9BSH5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.82■□□□□ 0.92
HDHD3Q9BSH5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDHD3Q9BSH5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDHD3Q9BSH5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDHD3Q9BSH5 DUSP8P4-201ENST00000399538 1761 ntBASIC20.82■□□□□ 0.92
HDHD3Q9BSH5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
HDHD3Q9BSH5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDHD3Q9BSH5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.81■□□□□ 0.92
HDHD3Q9BSH5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.81■□□□□ 0.92
HDHD3Q9BSH5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDHD3Q9BSH5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
HDHD3Q9BSH5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDHD3Q9BSH5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HDHD3Q9BSH5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDHD3Q9BSH5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDHD3Q9BSH5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms