Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.28■■□□□ 1
NICN1Q9BSH3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
NICN1Q9BSH3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.27■■□□□ 1
NICN1Q9BSH3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NICN1Q9BSH3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NICN1Q9BSH3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.27■■□□□ 1
NICN1Q9BSH3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NICN1Q9BSH3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.27■■□□□ 1
NICN1Q9BSH3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NICN1Q9BSH3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.27■■□□□ 1
NICN1Q9BSH3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.27■□□□□ 0.99
NICN1Q9BSH3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NICN1Q9BSH3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NICN1Q9BSH3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.26■□□□□ 0.99
NICN1Q9BSH3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NICN1Q9BSH3 AC145676.1-201ENST00000514988 2004 ntBASIC21.25■□□□□ 0.99
NICN1Q9BSH3 DUX4L28-201ENST00000623687 678 ntBASIC21.25■□□□□ 0.99
NICN1Q9BSH3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NICN1Q9BSH3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NICN1Q9BSH3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.24■□□□□ 0.99
NICN1Q9BSH3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NICN1Q9BSH3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NICN1Q9BSH3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NICN1Q9BSH3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NICN1Q9BSH3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.23■□□□□ 0.99
NICN1Q9BSH3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.23■□□□□ 0.99
NICN1Q9BSH3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.23■□□□□ 0.99
NICN1Q9BSH3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NICN1Q9BSH3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NICN1Q9BSH3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NICN1Q9BSH3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NICN1Q9BSH3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.22■□□□□ 0.99
NICN1Q9BSH3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
NICN1Q9BSH3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NICN1Q9BSH3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NICN1Q9BSH3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NICN1Q9BSH3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NICN1Q9BSH3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NICN1Q9BSH3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NICN1Q9BSH3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NICN1Q9BSH3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.21■□□□□ 0.99
NICN1Q9BSH3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NICN1Q9BSH3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NICN1Q9BSH3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NICN1Q9BSH3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NICN1Q9BSH3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NICN1Q9BSH3 AC020928.2-201ENST00000588717 2197 ntBASIC21.2■□□□□ 0.98
NICN1Q9BSH3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NICN1Q9BSH3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.19■□□□□ 0.98
NICN1Q9BSH3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.19■□□□□ 0.98
NICN1Q9BSH3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NICN1Q9BSH3 AP004609.3-201ENST00000610705 1884 ntBASIC21.18■□□□□ 0.98
NICN1Q9BSH3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NICN1Q9BSH3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NICN1Q9BSH3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NICN1Q9BSH3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.17■□□□□ 0.98
NICN1Q9BSH3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NICN1Q9BSH3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.15■□□□□ 0.98
NICN1Q9BSH3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.15■□□□□ 0.98
NICN1Q9BSH3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.15■□□□□ 0.98
NICN1Q9BSH3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.15■□□□□ 0.98
NICN1Q9BSH3 AC092803.2-201ENST00000564287 1899 ntBASIC21.15■□□□□ 0.98
NICN1Q9BSH3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NICN1Q9BSH3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NICN1Q9BSH3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.14■□□□□ 0.98
NICN1Q9BSH3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NICN1Q9BSH3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NICN1Q9BSH3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
NICN1Q9BSH3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NICN1Q9BSH3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NICN1Q9BSH3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NICN1Q9BSH3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.13■□□□□ 0.97
NICN1Q9BSH3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NICN1Q9BSH3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NICN1Q9BSH3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.12■□□□□ 0.97
NICN1Q9BSH3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.12■□□□□ 0.97
NICN1Q9BSH3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.12■□□□□ 0.97
NICN1Q9BSH3 DUSP8P4-201ENST00000399538 1761 ntBASIC21.12■□□□□ 0.97
NICN1Q9BSH3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NICN1Q9BSH3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NICN1Q9BSH3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NICN1Q9BSH3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NICN1Q9BSH3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NICN1Q9BSH3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
NICN1Q9BSH3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.1■□□□□ 0.97
NICN1Q9BSH3 MIR3665-201ENST00000578708 105 ntBASIC21.1■□□□□ 0.97
NICN1Q9BSH3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.1■□□□□ 0.97
NICN1Q9BSH3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NICN1Q9BSH3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NICN1Q9BSH3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NICN1Q9BSH3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.09■□□□□ 0.97
NICN1Q9BSH3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.09■□□□□ 0.97
NICN1Q9BSH3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NICN1Q9BSH3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NICN1Q9BSH3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NICN1Q9BSH3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NICN1Q9BSH3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.08■□□□□ 0.97
NICN1Q9BSH3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.08■□□□□ 0.97
NICN1Q9BSH3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NICN1Q9BSH3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms