Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.7■□□□□ 0.42
SCGB3A1Q96QR1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCGB3A1Q96QR1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCGB3A1Q96QR1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCGB3A1Q96QR1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SCGB3A1Q96QR1 DUSP8P4-201ENST00000399538 1761 ntBASIC17.69■□□□□ 0.42
SCGB3A1Q96QR1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCGB3A1Q96QR1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCGB3A1Q96QR1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCGB3A1Q96QR1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCGB3A1Q96QR1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCGB3A1Q96QR1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.69■□□□□ 0.42
SCGB3A1Q96QR1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB3A1Q96QR1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB3A1Q96QR1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB3A1Q96QR1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB3A1Q96QR1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.68■□□□□ 0.42
SCGB3A1Q96QR1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB3A1Q96QR1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCGB3A1Q96QR1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 AC092803.2-201ENST00000564287 1899 ntBASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCGB3A1Q96QR1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SCGB3A1Q96QR1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB3A1Q96QR1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB3A1Q96QR1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB3A1Q96QR1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB3A1Q96QR1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.66■□□□□ 0.42
SCGB3A1Q96QR1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCGB3A1Q96QR1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SCGB3A1Q96QR1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.65■□□□□ 0.42
SCGB3A1Q96QR1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SCGB3A1Q96QR1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCGB3A1Q96QR1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCGB3A1Q96QR1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCGB3A1Q96QR1 AL133380.1-201ENST00000506013 324 ntBASIC17.64■□□□□ 0.41
SCGB3A1Q96QR1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCGB3A1Q96QR1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCGB3A1Q96QR1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCGB3A1Q96QR1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCGB3A1Q96QR1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SCGB3A1Q96QR1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCGB3A1Q96QR1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SCGB3A1Q96QR1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCGB3A1Q96QR1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SCGB3A1Q96QR1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.63■□□□□ 0.41
SCGB3A1Q96QR1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCGB3A1Q96QR1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCGB3A1Q96QR1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCGB3A1Q96QR1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCGB3A1Q96QR1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SCGB3A1Q96QR1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.62■□□□□ 0.41
SCGB3A1Q96QR1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCGB3A1Q96QR1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCGB3A1Q96QR1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.62■□□□□ 0.41
SCGB3A1Q96QR1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SCGB3A1Q96QR1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SCGB3A1Q96QR1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCGB3A1Q96QR1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.61■□□□□ 0.41
SCGB3A1Q96QR1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.61■□□□□ 0.41
SCGB3A1Q96QR1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SCGB3A1Q96QR1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SCGB3A1Q96QR1 AC018358.1-201ENST00000631079 1402 ntBASIC17.61■□□□□ 0.41
SCGB3A1Q96QR1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCGB3A1Q96QR1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCGB3A1Q96QR1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCGB3A1Q96QR1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCGB3A1Q96QR1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCGB3A1Q96QR1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SCGB3A1Q96QR1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCGB3A1Q96QR1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCGB3A1Q96QR1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCGB3A1Q96QR1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCGB3A1Q96QR1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCGB3A1Q96QR1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCGB3A1Q96QR1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCGB3A1Q96QR1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.58■□□□□ 0.41
SCGB3A1Q96QR1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCGB3A1Q96QR1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SCGB3A1Q96QR1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SCGB3A1Q96QR1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCGB3A1Q96QR1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCGB3A1Q96QR1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCGB3A1Q96QR1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCGB3A1Q96QR1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.58■□□□□ 0.4
SCGB3A1Q96QR1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCGB3A1Q96QR1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.58■□□□□ 0.4
SCGB3A1Q96QR1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCGB3A1Q96QR1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
SCGB3A1Q96QR1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCGB3A1Q96QR1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCGB3A1Q96QR1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms