Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AP004833.2-201ENST00000532228 1454 ntBASIC26.23■■□□□ 1.79
NECTIN4Q96NY8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.22■■□□□ 1.79
NECTIN4Q96NY8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.22■■□□□ 1.79
NECTIN4Q96NY8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NECTIN4Q96NY8 AC010980.1-201ENST00000587192 1142 ntBASIC26.22■■□□□ 1.79
NECTIN4Q96NY8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.22■■□□□ 1.79
NECTIN4Q96NY8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
NECTIN4Q96NY8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
NECTIN4Q96NY8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NECTIN4Q96NY8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NECTIN4Q96NY8 AC093536.1-201ENST00000569153 554 ntBASIC26.21■■□□□ 1.79
NECTIN4Q96NY8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.21■■□□□ 1.79
NECTIN4Q96NY8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
NECTIN4Q96NY8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.2■■□□□ 1.79
NECTIN4Q96NY8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.2■■□□□ 1.79
NECTIN4Q96NY8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NECTIN4Q96NY8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.2■■□□□ 1.78
NECTIN4Q96NY8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
NECTIN4Q96NY8 RAP2CP1-202ENST00000605179 643 ntBASIC26.2■■□□□ 1.78
NECTIN4Q96NY8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
NECTIN4Q96NY8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
NECTIN4Q96NY8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.19■■□□□ 1.78
NECTIN4Q96NY8 AC139795.1-202ENST00000500444 432 ntBASIC26.19■■□□□ 1.78
NECTIN4Q96NY8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.19■■□□□ 1.78
NECTIN4Q96NY8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
NECTIN4Q96NY8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NECTIN4Q96NY8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NECTIN4Q96NY8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NECTIN4Q96NY8 YBX1P4-201ENST00000392794 808 ntBASIC26.18■■□□□ 1.78
NECTIN4Q96NY8 AC009299.2-201ENST00000482477 511 ntBASIC26.18■■□□□ 1.78
NECTIN4Q96NY8 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.18■■□□□ 1.78
NECTIN4Q96NY8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.18■■□□□ 1.78
NECTIN4Q96NY8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NECTIN4Q96NY8 KRT8P33-201ENST00000508125 1423 ntBASIC26.17■■□□□ 1.78
NECTIN4Q96NY8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
NECTIN4Q96NY8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
NECTIN4Q96NY8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.17■■□□□ 1.78
NECTIN4Q96NY8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.17■■□□□ 1.78
NECTIN4Q96NY8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.16■■□□□ 1.78
NECTIN4Q96NY8 MIR6765-201ENST00000614092 87 ntBASIC26.16■■□□□ 1.78
NECTIN4Q96NY8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
NECTIN4Q96NY8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.15■■□□□ 1.78
NECTIN4Q96NY8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
NECTIN4Q96NY8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NECTIN4Q96NY8 MIR3960-201ENST00000583311 91 ntBASIC26.15■■□□□ 1.78
NECTIN4Q96NY8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
NECTIN4Q96NY8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NECTIN4Q96NY8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.14■■□□□ 1.78
NECTIN4Q96NY8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
NECTIN4Q96NY8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NECTIN4Q96NY8 AC019069.1-201ENST00000610008 1333 ntBASIC26.14■■□□□ 1.77
NECTIN4Q96NY8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NECTIN4Q96NY8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NECTIN4Q96NY8 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.13■■□□□ 1.77
NECTIN4Q96NY8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.13■■□□□ 1.77
NECTIN4Q96NY8 SPCS2P3-201ENST00000500401 656 ntBASIC26.13■■□□□ 1.77
NECTIN4Q96NY8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
NECTIN4Q96NY8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NECTIN4Q96NY8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NECTIN4Q96NY8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.11■■□□□ 1.77
NECTIN4Q96NY8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
NECTIN4Q96NY8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NECTIN4Q96NY8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NECTIN4Q96NY8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
NECTIN4Q96NY8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NECTIN4Q96NY8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
NECTIN4Q96NY8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.11■■□□□ 1.77
NECTIN4Q96NY8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.1■■□□□ 1.77
NECTIN4Q96NY8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NECTIN4Q96NY8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.1■■□□□ 1.77
NECTIN4Q96NY8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.1■■□□□ 1.77
NECTIN4Q96NY8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NECTIN4Q96NY8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NECTIN4Q96NY8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NECTIN4Q96NY8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.09■■□□□ 1.77
NECTIN4Q96NY8 AC018755.3-202ENST00000596210 929 ntBASIC26.09■■□□□ 1.77
NECTIN4Q96NY8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NECTIN4Q96NY8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
NECTIN4Q96NY8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NECTIN4Q96NY8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.77
NECTIN4Q96NY8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
NECTIN4Q96NY8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.08■■□□□ 1.77
NECTIN4Q96NY8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.08■■□□□ 1.77
NECTIN4Q96NY8 AC103834.1-201ENST00000520383 144 ntBASIC26.08■■□□□ 1.77
NECTIN4Q96NY8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
NECTIN4Q96NY8 AC131212.1-201ENST00000613771 668 ntBASIC26.08■■□□□ 1.77
NECTIN4Q96NY8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NECTIN4Q96NY8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
NECTIN4Q96NY8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.06■■□□□ 1.76
NECTIN4Q96NY8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NECTIN4Q96NY8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.06■■□□□ 1.76
NECTIN4Q96NY8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.06■■□□□ 1.76
NECTIN4Q96NY8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NECTIN4Q96NY8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.06■■□□□ 1.76
NECTIN4Q96NY8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.05■■□□□ 1.76
NECTIN4Q96NY8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NECTIN4Q96NY8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NECTIN4Q96NY8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
NECTIN4Q96NY8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NECTIN4Q96NY8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms