Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC135983.2-203ENST00000454486 1613 ntBASIC23.38■■□□□ 1.33
SLC47A1Q96FL8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SLC47A1Q96FL8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.38■■□□□ 1.33
SLC47A1Q96FL8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC47A1Q96FL8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC47A1Q96FL8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC47A1Q96FL8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.37■■□□□ 1.33
SLC47A1Q96FL8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SLC47A1Q96FL8 MIR6090-201ENST00000622481 60 ntBASIC23.37■■□□□ 1.33
SLC47A1Q96FL8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SLC47A1Q96FL8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC47A1Q96FL8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
SLC47A1Q96FL8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.36■■□□□ 1.33
SLC47A1Q96FL8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC47A1Q96FL8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC47A1Q96FL8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC47A1Q96FL8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC47A1Q96FL8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SLC47A1Q96FL8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC47A1Q96FL8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.34■■□□□ 1.33
SLC47A1Q96FL8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SLC47A1Q96FL8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLC47A1Q96FL8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC47A1Q96FL8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC47A1Q96FL8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLC47A1Q96FL8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.33■■□□□ 1.33
SLC47A1Q96FL8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SLC47A1Q96FL8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.33■■□□□ 1.33
SLC47A1Q96FL8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SLC47A1Q96FL8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC47A1Q96FL8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SLC47A1Q96FL8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SLC47A1Q96FL8 WHAMMP2-203ENST00000563942 1603 ntBASIC23.32■■□□□ 1.32
SLC47A1Q96FL8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SLC47A1Q96FL8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
SLC47A1Q96FL8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLC47A1Q96FL8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SLC47A1Q96FL8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLC47A1Q96FL8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC47A1Q96FL8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.3■■□□□ 1.32
SLC47A1Q96FL8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.3■■□□□ 1.32
SLC47A1Q96FL8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.3■■□□□ 1.32
SLC47A1Q96FL8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.3■■□□□ 1.32
SLC47A1Q96FL8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SLC47A1Q96FL8 AC087741.3-201ENST00000624270 1347 ntBASIC23.3■■□□□ 1.32
SLC47A1Q96FL8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SLC47A1Q96FL8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC47A1Q96FL8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.29■■□□□ 1.32
SLC47A1Q96FL8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC47A1Q96FL8 AC092803.2-201ENST00000564287 1899 ntBASIC23.29■■□□□ 1.32
SLC47A1Q96FL8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.29■■□□□ 1.32
SLC47A1Q96FL8 DUSP8P4-201ENST00000399538 1761 ntBASIC23.29■■□□□ 1.32
SLC47A1Q96FL8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC47A1Q96FL8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SLC47A1Q96FL8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SLC47A1Q96FL8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC47A1Q96FL8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.28■■□□□ 1.32
SLC47A1Q96FL8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.28■■□□□ 1.32
SLC47A1Q96FL8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC47A1Q96FL8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC47A1Q96FL8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC47A1Q96FL8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC47A1Q96FL8 AL162393.1-201ENST00000437852 946 ntBASIC23.27■■□□□ 1.32
SLC47A1Q96FL8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SLC47A1Q96FL8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.31
SLC47A1Q96FL8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.26■■□□□ 1.31
SLC47A1Q96FL8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC47A1Q96FL8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC47A1Q96FL8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC47A1Q96FL8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.25■■□□□ 1.31
SLC47A1Q96FL8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC47A1Q96FL8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC47A1Q96FL8 LINC00273-201ENST00000539813 1452 ntBASIC23.24■■□□□ 1.31
SLC47A1Q96FL8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC47A1Q96FL8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC47A1Q96FL8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SLC47A1Q96FL8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 AC044849.2-201ENST00000606596 710 ntBASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 AP004609.3-201ENST00000610705 1884 ntBASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.23■■□□□ 1.31
SLC47A1Q96FL8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.22■■□□□ 1.31
SLC47A1Q96FL8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC47A1Q96FL8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.22■■□□□ 1.31
SLC47A1Q96FL8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.22■■□□□ 1.31
SLC47A1Q96FL8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC47A1Q96FL8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLC47A1Q96FL8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
SLC47A1Q96FL8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC47A1Q96FL8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SLC47A1Q96FL8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.19■■□□□ 1.3
SLC47A1Q96FL8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.19■■□□□ 1.3
SLC47A1Q96FL8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC47A1Q96FL8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms