Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN22Q8N7P3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN22Q8N7P3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN22Q8N7P3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN22Q8N7P3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.65■■□□□ 1.22
CLDN22Q8N7P3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.65■■□□□ 1.22
CLDN22Q8N7P3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN22Q8N7P3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
CLDN22Q8N7P3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLDN22Q8N7P3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLDN22Q8N7P3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLDN22Q8N7P3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLDN22Q8N7P3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN22Q8N7P3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN22Q8N7P3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN22Q8N7P3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.63■■□□□ 1.21
CLDN22Q8N7P3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN22Q8N7P3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN22Q8N7P3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN22Q8N7P3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CLDN22Q8N7P3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.62■■□□□ 1.21
CLDN22Q8N7P3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.62■■□□□ 1.21
CLDN22Q8N7P3 RPS2P35-201ENST00000443417 897 ntBASIC22.62■■□□□ 1.21
CLDN22Q8N7P3 AC145676.1-201ENST00000514988 2004 ntBASIC22.62■■□□□ 1.21
CLDN22Q8N7P3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.61■■□□□ 1.21
CLDN22Q8N7P3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN22Q8N7P3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN22Q8N7P3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.61■■□□□ 1.21
CLDN22Q8N7P3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
CLDN22Q8N7P3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.6■■□□□ 1.21
CLDN22Q8N7P3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.6■■□□□ 1.21
CLDN22Q8N7P3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN22Q8N7P3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN22Q8N7P3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.59■■□□□ 1.21
CLDN22Q8N7P3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.59■■□□□ 1.21
CLDN22Q8N7P3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.59■■□□□ 1.21
CLDN22Q8N7P3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.59■■□□□ 1.21
CLDN22Q8N7P3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN22Q8N7P3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN22Q8N7P3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CLDN22Q8N7P3 AC021231.2-201ENST00000594613 730 ntBASIC22.58■■□□□ 1.21
CLDN22Q8N7P3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN22Q8N7P3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN22Q8N7P3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN22Q8N7P3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN22Q8N7P3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CLDN22Q8N7P3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN22Q8N7P3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.56■■□□□ 1.2
CLDN22Q8N7P3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN22Q8N7P3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.56■■□□□ 1.2
CLDN22Q8N7P3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN22Q8N7P3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN22Q8N7P3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN22Q8N7P3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN22Q8N7P3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN22Q8N7P3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CLDN22Q8N7P3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN22Q8N7P3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN22Q8N7P3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN22Q8N7P3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN22Q8N7P3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.54■■□□□ 1.2
CLDN22Q8N7P3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.53■■□□□ 1.2
CLDN22Q8N7P3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN22Q8N7P3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CLDN22Q8N7P3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN22Q8N7P3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN22Q8N7P3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CLDN22Q8N7P3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.52■■□□□ 1.2
CLDN22Q8N7P3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CLDN22Q8N7P3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.52■■□□□ 1.2
CLDN22Q8N7P3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN22Q8N7P3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.52■■□□□ 1.19
CLDN22Q8N7P3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.51■■□□□ 1.19
CLDN22Q8N7P3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLDN22Q8N7P3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.51■■□□□ 1.19
CLDN22Q8N7P3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CLDN22Q8N7P3 AP004609.3-201ENST00000610705 1884 ntBASIC22.5■■□□□ 1.19
CLDN22Q8N7P3 DUX4L29-201ENST00000425409 679 ntBASIC22.5■■□□□ 1.19
CLDN22Q8N7P3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLDN22Q8N7P3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLDN22Q8N7P3 DUSP8P4-201ENST00000399538 1761 ntBASIC22.5■■□□□ 1.19
CLDN22Q8N7P3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLDN22Q8N7P3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.49■■□□□ 1.19
CLDN22Q8N7P3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.49■■□□□ 1.19
CLDN22Q8N7P3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.49■■□□□ 1.19
CLDN22Q8N7P3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLDN22Q8N7P3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.48■■□□□ 1.19
CLDN22Q8N7P3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLDN22Q8N7P3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.48■■□□□ 1.19
CLDN22Q8N7P3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.47■■□□□ 1.19
CLDN22Q8N7P3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLDN22Q8N7P3 AC092803.2-201ENST00000564287 1899 ntBASIC22.47■■□□□ 1.19
CLDN22Q8N7P3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.47■■□□□ 1.19
CLDN22Q8N7P3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLDN22Q8N7P3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.46■■□□□ 1.19
CLDN22Q8N7P3 AC110285.7-201ENST00000624417 1536 ntBASIC22.46■■□□□ 1.19
CLDN22Q8N7P3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.45■■□□□ 1.18
CLDN22Q8N7P3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLDN22Q8N7P3 AC142472.1-201ENST00000612013 1741 ntBASIC22.45■■□□□ 1.18
CLDN22Q8N7P3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms