Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
AFAP1Q8N556 RAP2CP1-202ENST00000605179 643 ntBASIC38.21■■■■□ 3.71
AFAP1Q8N556 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC38.21■■■■□ 3.71
AFAP1Q8N556 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC38.2■■■■□ 3.71
AFAP1Q8N556 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
AFAP1Q8N556 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC38.2■■■■□ 3.71
AFAP1Q8N556 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC38.19■■■■□ 3.7
AFAP1Q8N556 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC38.19■■■■□ 3.7
AFAP1Q8N556 AC009299.2-201ENST00000482477 511 ntBASIC38.19■■■■□ 3.7
AFAP1Q8N556 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
AFAP1Q8N556 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
AFAP1Q8N556 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
AFAP1Q8N556 AC103834.1-201ENST00000520383 144 ntBASIC38.18■■■■□ 3.7
AFAP1Q8N556 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC38.18■■■■□ 3.7
AFAP1Q8N556 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC38.17■■■■□ 3.7
AFAP1Q8N556 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
AFAP1Q8N556 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC38.17■■■■□ 3.7
AFAP1Q8N556 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
AFAP1Q8N556 RP9P-202ENST00000450133 1212 ntBASIC38.17■■■■□ 3.7
AFAP1Q8N556 BHLHE23-202ENST00000612929 1109 ntBASIC38.17■■■■□ 3.7
AFAP1Q8N556 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC38.17■■■■□ 3.7
AFAP1Q8N556 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC38.17■■■■□ 3.7
AFAP1Q8N556 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
AFAP1Q8N556 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC38.16■■■■□ 3.7
AFAP1Q8N556 AC093536.1-201ENST00000569153 554 ntBASIC38.16■■■■□ 3.7
AFAP1Q8N556 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
AFAP1Q8N556 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC38.15■■■■□ 3.7
AFAP1Q8N556 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC38.15■■■■□ 3.7
AFAP1Q8N556 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
AFAP1Q8N556 BEX3-202ENST00000372634 753 ntTSL 2 BASIC38.15■■■■□ 3.7
AFAP1Q8N556 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC38.15■■■■□ 3.7
AFAP1Q8N556 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
AFAP1Q8N556 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
AFAP1Q8N556 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
AFAP1Q8N556 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC38.14■■■■□ 3.7
AFAP1Q8N556 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
AFAP1Q8N556 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC38.13■■■■□ 3.69
AFAP1Q8N556 AC100797.4-201ENST00000631653 1827 ntBASIC38.13■■■■□ 3.69
AFAP1Q8N556 PVT1_1.1-201ENST00000615125 194 ntBASIC38.13■■■■□ 3.69
AFAP1Q8N556 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC38.13■■■■□ 3.69
AFAP1Q8N556 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC38.12■■■■□ 3.69
AFAP1Q8N556 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC38.12■■■■□ 3.69
AFAP1Q8N556 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
AFAP1Q8N556 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
AFAP1Q8N556 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC38.11■■■■□ 3.69
AFAP1Q8N556 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC38.11■■■■□ 3.69
AFAP1Q8N556 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC38.11■■■■□ 3.69
AFAP1Q8N556 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC38.11■■■■□ 3.69
AFAP1Q8N556 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC38.11■■■■□ 3.69
AFAP1Q8N556 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
AFAP1Q8N556 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC38.11■■■■□ 3.69
AFAP1Q8N556 AC019069.1-201ENST00000610008 1333 ntBASIC38.11■■■■□ 3.69
AFAP1Q8N556 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC38.1■■■■□ 3.69
AFAP1Q8N556 AC074183.2-201ENST00000623112 922 ntBASIC38.1■■■■□ 3.69
AFAP1Q8N556 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC38.09■■■■□ 3.69
AFAP1Q8N556 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
AFAP1Q8N556 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC38.08■■■■□ 3.69
AFAP1Q8N556 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
AFAP1Q8N556 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
AFAP1Q8N556 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC38.07■■■■□ 3.69
AFAP1Q8N556 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
AFAP1Q8N556 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC38.07■■■■□ 3.68
AFAP1Q8N556 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
AFAP1Q8N556 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
AFAP1Q8N556 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC38.06■■■■□ 3.68
AFAP1Q8N556 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC38.06■■■■□ 3.68
AFAP1Q8N556 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
AFAP1Q8N556 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
AFAP1Q8N556 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
AFAP1Q8N556 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC38.05■■■■□ 3.68
AFAP1Q8N556 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
AFAP1Q8N556 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC38.05■■■■□ 3.68
AFAP1Q8N556 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC38.04■■■■□ 3.68
AFAP1Q8N556 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
AFAP1Q8N556 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
AFAP1Q8N556 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC38.04■■■■□ 3.68
AFAP1Q8N556 AP004833.2-201ENST00000532228 1454 ntBASIC38.03■■■■□ 3.68
AFAP1Q8N556 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
AFAP1Q8N556 HES6-204ENST00000409182 863 ntTSL 2 BASIC38.03■■■■□ 3.68
AFAP1Q8N556 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC38.03■■■■□ 3.68
AFAP1Q8N556 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
AFAP1Q8N556 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC38.02■■■■□ 3.68
AFAP1Q8N556 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC38.02■■■■□ 3.68
AFAP1Q8N556 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC38.02■■■■□ 3.68
AFAP1Q8N556 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC38.02■■■■□ 3.68
AFAP1Q8N556 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC38.01■■■■□ 3.68
AFAP1Q8N556 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
AFAP1Q8N556 AC131212.1-201ENST00000613771 668 ntBASIC38.01■■■■□ 3.68
AFAP1Q8N556 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC38.01■■■■□ 3.68
AFAP1Q8N556 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC38■■■■□ 3.67
AFAP1Q8N556 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
AFAP1Q8N556 GUSBP5-201ENST00000418136 578 ntBASIC37.99■■■■□ 3.67
AFAP1Q8N556 MIR6765-201ENST00000614092 87 ntBASIC37.99■■■■□ 3.67
AFAP1Q8N556 THA1P-201ENST00000590384 1145 ntBASIC37.98■■■■□ 3.67
AFAP1Q8N556 OR2A1-AS1-204ENST00000470435 602 ntBASIC37.97■■■■□ 3.67
AFAP1Q8N556 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC37.97■■■■□ 3.67
AFAP1Q8N556 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
AFAP1Q8N556 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC37.97■■■■□ 3.67
AFAP1Q8N556 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
AFAP1Q8N556 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC37.96■■■■□ 3.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms