Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC56Q8IYG6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC56Q8IYG6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC56Q8IYG6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC56Q8IYG6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC56Q8IYG6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC56Q8IYG6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
LRRC56Q8IYG6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LRRC56Q8IYG6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.17■■□□□ 1.46
LRRC56Q8IYG6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
LRRC56Q8IYG6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LRRC56Q8IYG6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.17■■□□□ 1.46
LRRC56Q8IYG6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.17■■□□□ 1.46
LRRC56Q8IYG6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRRC56Q8IYG6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRRC56Q8IYG6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.16■■□□□ 1.46
LRRC56Q8IYG6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRRC56Q8IYG6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.16■■□□□ 1.46
LRRC56Q8IYG6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.15■■□□□ 1.46
LRRC56Q8IYG6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
LRRC56Q8IYG6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LRRC56Q8IYG6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LRRC56Q8IYG6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.15■■□□□ 1.46
LRRC56Q8IYG6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LRRC56Q8IYG6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
LRRC56Q8IYG6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
LRRC56Q8IYG6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LRRC56Q8IYG6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LRRC56Q8IYG6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LRRC56Q8IYG6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
LRRC56Q8IYG6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
LRRC56Q8IYG6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.13■■□□□ 1.45
LRRC56Q8IYG6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
LRRC56Q8IYG6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
LRRC56Q8IYG6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LRRC56Q8IYG6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LRRC56Q8IYG6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LRRC56Q8IYG6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRRC56Q8IYG6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRRC56Q8IYG6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.11■■□□□ 1.45
LRRC56Q8IYG6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRRC56Q8IYG6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRRC56Q8IYG6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.11■■□□□ 1.45
LRRC56Q8IYG6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRRC56Q8IYG6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRRC56Q8IYG6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRRC56Q8IYG6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LRRC56Q8IYG6 MIR4449-201ENST00000578365 66 ntBASIC24.1■■□□□ 1.45
LRRC56Q8IYG6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRRC56Q8IYG6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LRRC56Q8IYG6 AL121749.1-202ENST00000609313 2153 ntBASIC24.09■■□□□ 1.45
LRRC56Q8IYG6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.09■■□□□ 1.45
LRRC56Q8IYG6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LRRC56Q8IYG6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LRRC56Q8IYG6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.09■■□□□ 1.45
LRRC56Q8IYG6 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.08■■□□□ 1.45
LRRC56Q8IYG6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
LRRC56Q8IYG6 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.08■■□□□ 1.45
LRRC56Q8IYG6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
LRRC56Q8IYG6 WHAMMP3-201ENST00000611636 1609 ntBASIC24.08■■□□□ 1.45
LRRC56Q8IYG6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
LRRC56Q8IYG6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
LRRC56Q8IYG6 AL449106.1-201ENST00000608517 1980 ntBASIC24.07■■□□□ 1.44
LRRC56Q8IYG6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.07■■□□□ 1.44
LRRC56Q8IYG6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC56Q8IYG6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC56Q8IYG6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC56Q8IYG6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
LRRC56Q8IYG6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
LRRC56Q8IYG6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC56Q8IYG6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRC56Q8IYG6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRC56Q8IYG6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRC56Q8IYG6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.04■■□□□ 1.44
LRRC56Q8IYG6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC56Q8IYG6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC56Q8IYG6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.03■■□□□ 1.44
LRRC56Q8IYG6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC56Q8IYG6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.03■■□□□ 1.44
LRRC56Q8IYG6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC56Q8IYG6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
LRRC56Q8IYG6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
LRRC56Q8IYG6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.02■■□□□ 1.44
LRRC56Q8IYG6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC56Q8IYG6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC56Q8IYG6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms