Protein–RNA interactions for Protein: Q6P2D8

XRRA1, X-ray radiation resistance-associated protein 1, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1Q6P2D8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
XRRA1Q6P2D8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
XRRA1Q6P2D8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
XRRA1Q6P2D8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
XRRA1Q6P2D8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRRA1Q6P2D8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.32■■■□□ 2.12
XRRA1Q6P2D8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.31■■■□□ 2.12
XRRA1Q6P2D8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
XRRA1Q6P2D8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
XRRA1Q6P2D8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
XRRA1Q6P2D8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.31■■■□□ 2.12
XRRA1Q6P2D8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
XRRA1Q6P2D8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.3■■■□□ 2.12
XRRA1Q6P2D8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
XRRA1Q6P2D8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
XRRA1Q6P2D8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
XRRA1Q6P2D8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.3■■■□□ 2.12
XRRA1Q6P2D8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.3■■■□□ 2.12
XRRA1Q6P2D8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.29■■■□□ 2.12
XRRA1Q6P2D8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
XRRA1Q6P2D8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
XRRA1Q6P2D8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.28■■■□□ 2.12
XRRA1Q6P2D8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.28■■■□□ 2.12
XRRA1Q6P2D8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
XRRA1Q6P2D8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.28■■■□□ 2.12
XRRA1Q6P2D8 DRD5P2-201ENST00000421395 2012 ntBASIC28.28■■■□□ 2.12
XRRA1Q6P2D8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
XRRA1Q6P2D8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
XRRA1Q6P2D8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
XRRA1Q6P2D8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.26■■■□□ 2.12
XRRA1Q6P2D8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
XRRA1Q6P2D8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
XRRA1Q6P2D8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
XRRA1Q6P2D8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
XRRA1Q6P2D8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
XRRA1Q6P2D8 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.25■■■□□ 2.11
XRRA1Q6P2D8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
XRRA1Q6P2D8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRRA1Q6P2D8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRRA1Q6P2D8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRRA1Q6P2D8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.24■■■□□ 2.11
XRRA1Q6P2D8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.24■■■□□ 2.11
XRRA1Q6P2D8 NTF6A-201ENST00000591175 560 ntBASIC28.24■■■□□ 2.11
XRRA1Q6P2D8 AC139426.1-201ENST00000568218 2529 ntBASIC28.24■■■□□ 2.11
XRRA1Q6P2D8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
XRRA1Q6P2D8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
XRRA1Q6P2D8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
XRRA1Q6P2D8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
XRRA1Q6P2D8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.23■■■□□ 2.11
XRRA1Q6P2D8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
XRRA1Q6P2D8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
XRRA1Q6P2D8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
XRRA1Q6P2D8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
XRRA1Q6P2D8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
XRRA1Q6P2D8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.21■■■□□ 2.11
XRRA1Q6P2D8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.21■■■□□ 2.11
XRRA1Q6P2D8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
XRRA1Q6P2D8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.2■■■□□ 2.11
XRRA1Q6P2D8 SMPD5-203ENST00000639008 1464 ntBASIC28.2■■■□□ 2.1
XRRA1Q6P2D8 AC007029.1-201ENST00000604183 313 ntBASIC28.19■■■□□ 2.1
XRRA1Q6P2D8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.19■■■□□ 2.1
XRRA1Q6P2D8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
XRRA1Q6P2D8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
XRRA1Q6P2D8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.18■■■□□ 2.1
XRRA1Q6P2D8 AC025884.2-201ENST00000553429 711 ntBASIC28.18■■■□□ 2.1
XRRA1Q6P2D8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
XRRA1Q6P2D8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
XRRA1Q6P2D8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
XRRA1Q6P2D8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.17■■■□□ 2.1
XRRA1Q6P2D8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
XRRA1Q6P2D8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
XRRA1Q6P2D8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
XRRA1Q6P2D8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
XRRA1Q6P2D8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
XRRA1Q6P2D8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.16■■■□□ 2.1
XRRA1Q6P2D8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
XRRA1Q6P2D8 WHAMMP3-201ENST00000611636 1609 ntBASIC28.16■■■□□ 2.1
XRRA1Q6P2D8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
XRRA1Q6P2D8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
XRRA1Q6P2D8 U85056.1-201ENST00000616429 682 ntBASIC28.15■■■□□ 2.1
XRRA1Q6P2D8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
XRRA1Q6P2D8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
XRRA1Q6P2D8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
XRRA1Q6P2D8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.14■■■□□ 2.1
XRRA1Q6P2D8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.13■■■□□ 2.09
XRRA1Q6P2D8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
XRRA1Q6P2D8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
XRRA1Q6P2D8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.11■■■□□ 2.09
XRRA1Q6P2D8 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.11■■■□□ 2.09
XRRA1Q6P2D8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.11■■■□□ 2.09
XRRA1Q6P2D8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
XRRA1Q6P2D8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
XRRA1Q6P2D8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.11■■■□□ 2.09
XRRA1Q6P2D8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
XRRA1Q6P2D8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.1■■■□□ 2.09
XRRA1Q6P2D8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
XRRA1Q6P2D8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.1■■■□□ 2.09
XRRA1Q6P2D8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
XRRA1Q6P2D8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.1■■■□□ 2.09
XRRA1Q6P2D8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms