Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
NIPAL1Q6NVV3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
NIPAL1Q6NVV3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.87■■□□□ 1.41
NIPAL1Q6NVV3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NIPAL1Q6NVV3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.87■■□□□ 1.41
NIPAL1Q6NVV3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NIPAL1Q6NVV3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
NIPAL1Q6NVV3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
NIPAL1Q6NVV3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NIPAL1Q6NVV3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NIPAL1Q6NVV3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NIPAL1Q6NVV3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NIPAL1Q6NVV3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NIPAL1Q6NVV3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NIPAL1Q6NVV3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
NIPAL1Q6NVV3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NIPAL1Q6NVV3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
NIPAL1Q6NVV3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
NIPAL1Q6NVV3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
NIPAL1Q6NVV3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NIPAL1Q6NVV3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NIPAL1Q6NVV3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
NIPAL1Q6NVV3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
NIPAL1Q6NVV3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NIPAL1Q6NVV3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.81■■□□□ 1.4
NIPAL1Q6NVV3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.8■■□□□ 1.4
NIPAL1Q6NVV3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NIPAL1Q6NVV3 MIR219A2-201ENST00000608502 1504 ntBASIC23.8■■□□□ 1.4
NIPAL1Q6NVV3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NIPAL1Q6NVV3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NIPAL1Q6NVV3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NIPAL1Q6NVV3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
NIPAL1Q6NVV3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NIPAL1Q6NVV3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
NIPAL1Q6NVV3 AL121749.1-202ENST00000609313 2153 ntBASIC23.79■■□□□ 1.4
NIPAL1Q6NVV3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.79■■□□□ 1.4
NIPAL1Q6NVV3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NIPAL1Q6NVV3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NIPAL1Q6NVV3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NIPAL1Q6NVV3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NIPAL1Q6NVV3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
NIPAL1Q6NVV3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NIPAL1Q6NVV3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.79■■□□□ 1.4
NIPAL1Q6NVV3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.79■■□□□ 1.4
NIPAL1Q6NVV3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.78■■□□□ 1.4
NIPAL1Q6NVV3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NIPAL1Q6NVV3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NIPAL1Q6NVV3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.78■■□□□ 1.4
NIPAL1Q6NVV3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NIPAL1Q6NVV3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NIPAL1Q6NVV3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
NIPAL1Q6NVV3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NIPAL1Q6NVV3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NIPAL1Q6NVV3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NIPAL1Q6NVV3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NIPAL1Q6NVV3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NIPAL1Q6NVV3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NIPAL1Q6NVV3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.76■■□□□ 1.39
NIPAL1Q6NVV3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NIPAL1Q6NVV3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NIPAL1Q6NVV3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NIPAL1Q6NVV3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NIPAL1Q6NVV3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
NIPAL1Q6NVV3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NIPAL1Q6NVV3 AC126177.7-201ENST00000547904 679 ntBASIC23.75■■□□□ 1.39
NIPAL1Q6NVV3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.75■■□□□ 1.39
NIPAL1Q6NVV3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NIPAL1Q6NVV3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NIPAL1Q6NVV3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NIPAL1Q6NVV3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NIPAL1Q6NVV3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.74■■□□□ 1.39
NIPAL1Q6NVV3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NIPAL1Q6NVV3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NIPAL1Q6NVV3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.74■■□□□ 1.39
NIPAL1Q6NVV3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
NIPAL1Q6NVV3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
NIPAL1Q6NVV3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
NIPAL1Q6NVV3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
NIPAL1Q6NVV3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
NIPAL1Q6NVV3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.72■■□□□ 1.39
NIPAL1Q6NVV3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.72■■□□□ 1.39
NIPAL1Q6NVV3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NIPAL1Q6NVV3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.72■■□□□ 1.39
NIPAL1Q6NVV3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NIPAL1Q6NVV3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NIPAL1Q6NVV3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NIPAL1Q6NVV3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NIPAL1Q6NVV3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.71■■□□□ 1.39
NIPAL1Q6NVV3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms