Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LIN54Q6MZP7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LIN54Q6MZP7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.1■□□□□ 0.97
LIN54Q6MZP7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LIN54Q6MZP7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.1■□□□□ 0.97
LIN54Q6MZP7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LIN54Q6MZP7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LIN54Q6MZP7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LIN54Q6MZP7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.1■□□□□ 0.97
LIN54Q6MZP7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.1■□□□□ 0.97
LIN54Q6MZP7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.1■□□□□ 0.97
LIN54Q6MZP7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LIN54Q6MZP7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
LIN54Q6MZP7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIN54Q6MZP7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIN54Q6MZP7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LIN54Q6MZP7 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.09■□□□□ 0.97
LIN54Q6MZP7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIN54Q6MZP7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIN54Q6MZP7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIN54Q6MZP7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIN54Q6MZP7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIN54Q6MZP7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LIN54Q6MZP7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
LIN54Q6MZP7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.08■□□□□ 0.97
LIN54Q6MZP7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LIN54Q6MZP7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.08■□□□□ 0.96
LIN54Q6MZP7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LIN54Q6MZP7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LIN54Q6MZP7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LIN54Q6MZP7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LIN54Q6MZP7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LIN54Q6MZP7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LIN54Q6MZP7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.07■□□□□ 0.96
LIN54Q6MZP7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LIN54Q6MZP7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.07■□□□□ 0.96
LIN54Q6MZP7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LIN54Q6MZP7 AC093323.1-202ENST00000635031 2045 ntBASIC21.06■□□□□ 0.96
LIN54Q6MZP7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIN54Q6MZP7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LIN54Q6MZP7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.06■□□□□ 0.96
LIN54Q6MZP7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIN54Q6MZP7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIN54Q6MZP7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.05■□□□□ 0.96
LIN54Q6MZP7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIN54Q6MZP7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.05■□□□□ 0.96
LIN54Q6MZP7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIN54Q6MZP7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIN54Q6MZP7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIN54Q6MZP7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LIN54Q6MZP7 AC005559.1-201ENST00000589661 871 ntBASIC21.04■□□□□ 0.96
LIN54Q6MZP7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.04■□□□□ 0.96
LIN54Q6MZP7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIN54Q6MZP7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
LIN54Q6MZP7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIN54Q6MZP7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIN54Q6MZP7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.03■□□□□ 0.96
LIN54Q6MZP7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LIN54Q6MZP7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
LIN54Q6MZP7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIN54Q6MZP7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIN54Q6MZP7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LIN54Q6MZP7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LIN54Q6MZP7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIN54Q6MZP7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIN54Q6MZP7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIN54Q6MZP7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LIN54Q6MZP7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LIN54Q6MZP7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LIN54Q6MZP7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.02■□□□□ 0.96
LIN54Q6MZP7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LIN54Q6MZP7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LIN54Q6MZP7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.02■□□□□ 0.95
LIN54Q6MZP7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LIN54Q6MZP7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN54Q6MZP7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LIN54Q6MZP7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LIN54Q6MZP7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN54Q6MZP7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LIN54Q6MZP7 AC100797.4-201ENST00000631653 1827 ntBASIC21■□□□□ 0.95
LIN54Q6MZP7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LIN54Q6MZP7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21■□□□□ 0.95
LIN54Q6MZP7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21■□□□□ 0.95
LIN54Q6MZP7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LIN54Q6MZP7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LIN54Q6MZP7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN54Q6MZP7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN54Q6MZP7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.99■□□□□ 0.95
LIN54Q6MZP7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.99■□□□□ 0.95
LIN54Q6MZP7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms