Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 TOS1YBR162C 1368 nt7.97□□□□□ -1.13
SSL2Q00578 GSH1YJL101C 2037 nt7.96□□□□□ -1.13
SSL2Q00578 SUF3tG(CCC)D 72 nt7.96□□□□□ -1.14
SSL2Q00578 REG2YBR050C 1017 nt7.96□□□□□ -1.14
SSL2Q00578 IRC5YFR038W 2562 nt7.95□□□□□ -1.14
SSL2Q00578 YDR476CYDR476C 675 nt7.95□□□□□ -1.14
SSL2Q00578 CEM1YER061C 1329 nt7.95□□□□□ -1.14
SSL2Q00578 AIM2YAL049C 741 nt7.94□□□□□ -1.14
SSL2Q00578 CCT3YJL014W 1605 nt7.93□□□□□ -1.14
SSL2Q00578 SLA2YNL243W 2907 nt7.92□□□□□ -1.14
SSL2Q00578 PIL1YGR086C 1020 nt7.92□□□□□ -1.14
SSL2Q00578 CCR4YAL021C 2514 nt7.92□□□□□ -1.14
SSL2Q00578 TDP1YBR223C 1635 nt7.92□□□□□ -1.14
SSL2Q00578 RQC1YDR333C 2172 nt7.91□□□□□ -1.14
SSL2Q00578 DOC1YGL240W 753 nt7.91□□□□□ -1.14
SSL2Q00578 YIA6YIL006W 1122 nt7.91□□□□□ -1.14
SSL2Q00578 SNT309YPR101W 528 nt7.91□□□□□ -1.14
SSL2Q00578 SSC1YJR045C 1965 nt7.91□□□□□ -1.14
SSL2Q00578 YCR049CYCR049C 447 nt7.9□□□□□ -1.14
SSL2Q00578 ERS1YCR075C 783 nt7.9□□□□□ -1.14
SSL2Q00578 HPT1YDR399W 666 nt7.9□□□□□ -1.14
SSL2Q00578 YJL213WYJL213W 996 nt7.9□□□□□ -1.14
SSL2Q00578 YLL066CYLL066C 3618 nt7.9□□□□□ -1.14
SSL2Q00578 HXT13YEL069C 1695 nt7.89□□□□□ -1.15
SSL2Q00578 MLS1YNL117W 1665 nt7.89□□□□□ -1.15
SSL2Q00578 UBP13YBL067C 2244 nt7.89□□□□□ -1.15
SSL2Q00578 NTG1YAL015C 1200 nt7.89□□□□□ -1.15
SSL2Q00578 MGM101YJR144W 810 nt7.89□□□□□ -1.15
SSL2Q00578 MSI1YBR195C 1269 nt7.89□□□□□ -1.15
SSL2Q00578 SNU66YOR308C 1764 nt7.89□□□□□ -1.15
SSL2Q00578 MAM3YOL060C 2121 nt7.88□□□□□ -1.15
SSL2Q00578 MSG5YNL053W 1470 nt7.88□□□□□ -1.15
SSL2Q00578 THR1YHR025W 1074 nt7.88□□□□□ -1.15
SSL2Q00578 YPR127WYPR127W 1038 nt7.88□□□□□ -1.15
SSL2Q00578 CYB2YML054C 1776 nt7.87□□□□□ -1.15
SSL2Q00578 PET117YER058W 324 nt7.87□□□□□ -1.15
SSL2Q00578 MCH2YKL221W 1422 nt7.86□□□□□ -1.15
SSL2Q00578 AMN1YBR158W 1650 nt7.86□□□□□ -1.15
SSL2Q00578 YGL081WYGL081W 963 nt7.86□□□□□ -1.15
SSL2Q00578 RTC4YNL254C 1206 nt7.85□□□□□ -1.15
SSL2Q00578 ARC35YNR035C 1029 nt7.85□□□□□ -1.15
SSL2Q00578 MIP1YOR330C 3765 nt7.85□□□□□ -1.15
SSL2Q00578 ADE2YOR128C 1716 nt7.84□□□□□ -1.15
SSL2Q00578 MRPL28YDR462W 444 nt7.84□□□□□ -1.15
SSL2Q00578 MTR3YGR158C 753 nt7.84□□□□□ -1.15
SSL2Q00578 FUS3YBL016W 1062 nt7.84□□□□□ -1.15
SSL2Q00578 MIX17YMR002W 471 nt7.84□□□□□ -1.15
SSL2Q00578 DLD1YDL174C 1764 nt7.84□□□□□ -1.15
SSL2Q00578 MHP1YJL042W 4197 nt7.83□□□□□ -1.16
SSL2Q00578 PAM17YKR065C 594 nt7.83□□□□□ -1.16
SSL2Q00578 DPM1YPR183W 804 nt7.83□□□□□ -1.16
SSL2Q00578 CIT2YCR005C 1383 nt7.83□□□□□ -1.16
SSL2Q00578 MSB3YNL293W 1902 nt7.82□□□□□ -1.16
SSL2Q00578 SOD2YHR008C 702 nt7.82□□□□□ -1.16
SSL2Q00578 ARA2YMR041C 1008 nt7.82□□□□□ -1.16
SSL2Q00578 RPL43AYPR043W 279 nt7.82□□□□□ -1.16
SSL2Q00578 SDH8YBR269C 417 nt7.82□□□□□ -1.16
SSL2Q00578 YBR241CYBR241C 1467 nt7.81□□□□□ -1.16
SSL2Q00578 TAH11YJR046W 1815 nt7.81□□□□□ -1.16
SSL2Q00578 RGD2YFL047W 2145 nt7.8□□□□□ -1.16
SSL2Q00578 YAL045CYAL045C 309 nt7.8□□□□□ -1.16
SSL2Q00578 YLR122CYLR122C 378 nt7.8□□□□□ -1.16
SSL2Q00578 HBN1YCL026C-B 582 nt7.8□□□□□ -1.16
SSL2Q00578 UME1YPL139C 1383 nt7.8□□□□□ -1.16
SSL2Q00578 PDA1YER178W 1263 nt7.79□□□□□ -1.16
SSL2Q00578 RPL2BYIL018W 765 nt7.79□□□□□ -1.16
SSL2Q00578 YNR014WYNR014W 639 nt7.79□□□□□ -1.16
SSL2Q00578 TRS31YDR472W 852 nt7.78□□□□□ -1.16
SSL2Q00578 YOL099CYOL099C 492 nt7.78□□□□□ -1.16
SSL2Q00578 PET494YNR045W 1470 nt7.77□□□□□ -1.17
SSL2Q00578 YML122CYML122C 381 nt7.77□□□□□ -1.17
SSL2Q00578 SMK1YPR054W 1167 nt7.77□□□□□ -1.17
SSL2Q00578 LCP5YER127W 1074 nt7.76□□□□□ -1.17
SSL2Q00578 KAE1YKR038C 1161 nt7.76□□□□□ -1.17
SSL2Q00578 RIB1YBL033C 1038 nt7.76□□□□□ -1.17
SSL2Q00578 PAC2YER007W 1557 nt7.76□□□□□ -1.17
SSL2Q00578 NFS1YCL017C 1494 nt7.75□□□□□ -1.17
SSL2Q00578 ECM38YLR299W 1983 nt7.75□□□□□ -1.17
SSL2Q00578 TUF1YOR187W 1314 nt7.75□□□□□ -1.17
SSL2Q00578 HDA1YNL021W 2121 nt7.74□□□□□ -1.17
SSL2Q00578 YPR130CYPR130C 408 nt7.73□□□□□ -1.17
SSL2Q00578 YJL045WYJL045W 1905 nt7.73□□□□□ -1.17
SSL2Q00578 RSP5YER125W 2430 nt7.73□□□□□ -1.17
SSL2Q00578 ICL2YPR006C 1728 nt7.72□□□□□ -1.17
SSL2Q00578 TRR1YDR353W 960 nt7.72□□□□□ -1.17
SSL2Q00578 DYS1YHR068W 1164 nt7.72□□□□□ -1.17
SSL2Q00578 MEU1YLR017W 1014 nt7.72□□□□□ -1.17
SSL2Q00578 YLR358CYLR358C 564 nt7.72□□□□□ -1.17
SSL2Q00578 ATP23YNR020C 813 nt7.72□□□□□ -1.17
SSL2Q00578 MBF1YOR298C-A 456 nt7.72□□□□□ -1.17
SSL2Q00578 PLB2YMR006C 2121 nt7.72□□□□□ -1.17
SSL2Q00578 CBR1YIL043C 855 nt7.71□□□□□ -1.18
SSL2Q00578 CYS3YAL012W 1185 nt7.71□□□□□ -1.18
SSL2Q00578 YOR343CYOR343C 327 nt7.71□□□□□ -1.18
SSL2Q00578 URH1YDR400W 1023 nt7.7□□□□□ -1.18
SSL2Q00578 RRN10YBL025W 438 nt7.7□□□□□ -1.18
SSL2Q00578 BRN1YBL097W 2265 nt7.69□□□□□ -1.18
SSL2Q00578 PIH1YHR034C 1035 nt7.69□□□□□ -1.18
SSL2Q00578 PEX31YGR004W 1389 nt7.69□□□□□ -1.18
SSL2Q00578 YLL058WYLL058W 1728 nt7.69□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms