RNA–Protein interactions for RNA: YBR269C

SDH8, Transcript of Protein required for assembly of succinate dehydrogenase, yeastyeast

Gene SDH8, Length 417 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH8YBR269C MON2P48563 1636 aaPredicted RBP17.21■□□□□ 0.35
SDH8YBR269C INO80P53115 1489 aa17.1■□□□□ 0.33
SDH8YBR269C DNA2P38859 1522 aa16.29■□□□□ 0.2
SDH8YBR269C SWR1Q05471 1514 aa16.14■□□□□ 0.18
SDH8YBR269C KOG1P38873 1557 aa16.07■□□□□ 0.16
SDH8YBR269C RSE1Q04693 1361 aaKnown RBP15.88■□□□□ 0.13
SDH8YBR269C TCB3Q03640 1545 aaKnown RBP15.88■□□□□ 0.13
SDH8YBR269C TY1B-DR4Q07793 1604 aa15.86■□□□□ 0.13
SDH8YBR269C SGS1P35187 1447 aa15.26■□□□□ 0.03
SDH8YBR269C SPA2P23201 1466 aaKnown RBP15.17■□□□□ 0.02
SDH8YBR269C HSL1P34244 1518 aa15.17■□□□□ 0.02
SDH8YBR269C SPT6P23615 1451 aaKnown RBP15.15■□□□□ 0.02
SDH8YBR269C ECM5Q03214 1411 aa15□□□□□ -0.01
SDH8YBR269C THO2P53552 1597 aaKnown RBP14.9□□□□□ -0.02
SDH8YBR269C BUD4P47136 1447 aa14.87□□□□□ -0.03
SDH8YBR269C HIR3P47171 1648 aa14.8□□□□□ -0.04
SDH8YBR269C MTC1P47018 478 aaKnown RBP14.78□□□□□ -0.04
SDH8YBR269C MDS3P53094 1487 aa14.75□□□□□ -0.05
SDH8YBR269C REV3P14284 1504 aa14.63□□□□□ -0.07
SDH8YBR269C PEP1P32319 1579 aa14.59□□□□□ -0.07
SDH8YBR269C XRN1P22147 1528 aaKnown RBP14.42□□□□□ -0.1
SDH8YBR269C BPT1P14772 1559 aa14.39□□□□□ -0.11
SDH8YBR269C ATG2P53855 1592 aa14.38□□□□□ -0.11
SDH8YBR269C YCF1P39109 1515 aaKnown RBP14.15□□□□□ -0.14
SDH8YBR269C SSK2P53599 1579 aa14.15□□□□□ -0.14
SDH8YBR269C MIF2P35201 549 aa14.08□□□□□ -0.16
SDH8YBR269C SIN3P22579 1536 aa14.03□□□□□ -0.16
SDH8YBR269C SKI3P17883 1432 aaKnown RBP13.98□□□□□ -0.17
SDH8YBR269C TAF2P23255 1407 aa13.9□□□□□ -0.19
SDH8YBR269C MET5P47169 1442 aa13.89□□□□□ -0.19
SDH8YBR269C MYO2P19524 1574 aaKnown RBP13.84□□□□□ -0.19
SDH8YBR269C UFD4P33202 1483 aa13.83□□□□□ -0.2
SDH8YBR269C SSN2P38931 1420 aa13.81□□□□□ -0.2
SDH8YBR269C ESP1Q03018 1630 aa13.79□□□□□ -0.2
SDH8YBR269C LTE1P07866 1435 aa13.79□□□□□ -0.2
SDH8YBR269C CHD1P32657 1468 aa13.71□□□□□ -0.21
SDH8YBR269C CDC25P04821 1589 aa13.71□□□□□ -0.22
SDH8YBR269C DNF1P32660 1571 aa13.7□□□□□ -0.22
SDH8YBR269C BNI1P41832 1953 aa13.69□□□□□ -0.22
SDH8YBR269C SCC2Q04002 1493 aa13.69□□□□□ -0.22
SDH8YBR269C YPK9Q12697 1472 aa13.69□□□□□ -0.22
SDH8YBR269C RPO31P04051 1460 aa13.65□□□□□ -0.22
SDH8YBR269C RPA190P10964 1664 aaKnown RBP13.64□□□□□ -0.23
SDH8YBR269C ESC1Q03661 1658 aaKnown RBP13.63□□□□□ -0.23
SDH8YBR269C RKR1Q04781 1562 aa13.62□□□□□ -0.23
SDH8YBR269C TY1B-BRQ12193 1756 aa13.55□□□□□ -0.24
SDH8YBR269C TY1B-GR3Q12316 1755 aa13.55□□□□□ -0.24
SDH8YBR269C TY1B-ORQ92393 1755 aa13.55□□□□□ -0.24
SDH8YBR269C PAN1P32521 1480 aa13.55□□□□□ -0.24
SDH8YBR269C GEA2P39993 1459 aaKnown RBP13.55□□□□□ -0.24
SDH8YBR269C TY2B-LR1P0C2J3 1770 aa13.54□□□□□ -0.24
SDH8YBR269C TY2B-FP0CX63 1770 aa13.54□□□□□ -0.24
SDH8YBR269C TY2B-GR2P0CX64 1770 aa13.54□□□□□ -0.24
SDH8YBR269C TY2B-CP25384 1770 aa13.54□□□□□ -0.24
SDH8YBR269C TY2B-DR2Q03494 1770 aa13.54□□□□□ -0.24
SDH8YBR269C TY1B-DR1Q03855 1755 aa13.54□□□□□ -0.24
SDH8YBR269C TY2B-DR3Q07791 1770 aaKnown RBP13.54□□□□□ -0.24
SDH8YBR269C TY2B-OR1Q12113 1770 aa13.54□□□□□ -0.24
SDH8YBR269C TY2B-DR1Q12472 1770 aa13.54□□□□□ -0.24
SDH8YBR269C TY2B-OR2Q12501 1770 aa13.54□□□□□ -0.24
SDH8YBR269C YFR006WP43590 535 aa13.53□□□□□ -0.24
SDH8YBR269C ITT1Q04638 464 aa13.49□□□□□ -0.25
SDH8YBR269C ABP1P15891 592 aaKnown RBP13.44□□□□□ -0.26
SDH8YBR269C TY1B-HO13535 1793 aa13.38□□□□□ -0.27
SDH8YBR269C TY1B-DR5P0C2I2 1755 aa13.38□□□□□ -0.27
SDH8YBR269C TY1B-DR6P0C2I3 1755 aa13.38□□□□□ -0.27
SDH8YBR269C TY1B-LR2P0C2I5 1755 aa13.38□□□□□ -0.27
SDH8YBR269C TY1B-LR3P0C2I6 1755 aaKnown RBP13.38□□□□□ -0.27
SDH8YBR269C TY1B-PR1P0C2I9 1755 aaKnown RBP13.38□□□□□ -0.27
SDH8YBR269C TY1B-PR2P0C2J0 1756 aa13.38□□□□□ -0.27
SDH8YBR269C TY1B-PR3P0C2J1 1755 aaKnown RBP13.38□□□□□ -0.27
SDH8YBR269C TY1B-JR1P47098 1755 aa13.38□□□□□ -0.27
SDH8YBR269C TY1B-ML2Q03434 1755 aaKnown RBP13.38□□□□□ -0.27
SDH8YBR269C TY1B-ER1Q03612 1755 aa13.38□□□□□ -0.27
SDH8YBR269C TY1B-ML1Q04711 1755 aaKnown RBP13.38□□□□□ -0.27
SDH8YBR269C TY1B-GR2Q12269 1755 aa13.38□□□□□ -0.27
SDH8YBR269C TY1B-OLQ12273 1755 aa13.38□□□□□ -0.27
SDH8YBR269C TY1B-PLQ12414 1755 aaKnown RBP13.38□□□□□ -0.27
SDH8YBR269C TOP2P06786 1428 aaKnown RBP13.36□□□□□ -0.27
SDH8YBR269C MMS1Q06211 1407 aa13.36□□□□□ -0.27
SDH8YBR269C TY2B-BQ12491 1770 aa13.35□□□□□ -0.27
SDH8YBR269C RQC2Q12532 1038 aaKnown RBP13.34□□□□□ -0.27
SDH8YBR269C IRC20Q06554 1556 aa13.32□□□□□ -0.28
SDH8YBR269C TRM732Q03496 1420 aa13.29□□□□□ -0.28
SDH8YBR269C MMS22Q06164 1454 aa13.29□□□□□ -0.28
SDH8YBR269C DRS1P32892 752 aaKnown RBP13.28□□□□□ -0.28
SDH8YBR269C TY1B-DR3Q99231 1755 aa13.27□□□□□ -0.28
SDH8YBR269C DRS2P39524 1355 aa13.26□□□□□ -0.29
SDH8YBR269C YRF1-1P0CX20 1796 aa13.25□□□□□ -0.29
SDH8YBR269C YRF1-5P0CX21 1796 aa13.25□□□□□ -0.29
SDH8YBR269C YRF1-8P0CX22 1796 aa13.25□□□□□ -0.29
SDH8YBR269C VPS15P22219 1454 aa13.21□□□□□ -0.3
SDH8YBR269C NUP159P40477 1460 aa13.18□□□□□ -0.3
SDH8YBR269C DNF2Q12675 1612 aa13.13□□□□□ -0.31
SDH8YBR269C TY1B-JR2P47100 1755 aaKnown RBP13.08□□□□□ -0.32
SDH8YBR269C TY1B-ER2Q03619 1755 aa13.08□□□□□ -0.32
SDH8YBR269C TY1B-MR1Q04214 1755 aa13.08□□□□□ -0.32
SDH8YBR269C TY1B-MR2Q04670 1755 aaKnown RBP13.08□□□□□ -0.32
SDH8YBR269C TY1B-LR1Q12088 1755 aaKnown RBP13.08□□□□□ -0.32
SDH8YBR269C TY1B-NL1Q12112 1755 aa13.08□□□□□ -0.32
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms