RNA–Protein interactions for RNA: YDR333C

RQC1, Transcript of Component of the ribosome quality control complex (RQC), yeastyeast

Gene RQC1, Length 2,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RQC1YDR333C SPA2P23201 1466 aaKnown RBP10.57□□□□□ -0.72
RQC1YDR333C SGS1P35187 1447 aa10.46□□□□□ -0.73
RQC1YDR333C SSN2P38931 1420 aa10.36□□□□□ -0.75
RQC1YDR333C SKI3P17883 1432 aaKnown RBP10.15□□□□□ -0.78
RQC1YDR333C DRS1P32892 752 aaKnown RBP10.04□□□□□ -0.8
RQC1YDR333C INO80P53115 1489 aa10.03□□□□□ -0.8
RQC1YDR333C NOP2P40991 618 aaKnown RBP10.01□□□□□ -0.81
RQC1YDR333C BFR2Q06631 534 aaKnown RBP9.95□□□□□ -0.82
RQC1YDR333C NSR1P27476 414 aaKnown RBP RIP-Chip data9.84□□□□□ -0.83not detected
RQC1YDR333C CHD1P32657 1468 aa9.7□□□□□ -0.86
RQC1YDR333C MMS22Q06164 1454 aa9.65□□□□□ -0.86
RQC1YDR333C TCB3Q03640 1545 aaKnown RBP9.59□□□□□ -0.87
RQC1YDR333C XRN1P22147 1528 aaKnown RBP9.52□□□□□ -0.88
RQC1YDR333C UFD4P33202 1483 aa9.5□□□□□ -0.89
RQC1YDR333C ENP1P38333 483 aaKnown RBP9.4□□□□□ -0.91
RQC1YDR333C HSL1P34244 1518 aa9.39□□□□□ -0.91
RQC1YDR333C TY1B-DR4Q07793 1604 aa9.39□□□□□ -0.91
RQC1YDR333C RSE1Q04693 1361 aaKnown RBP9.38□□□□□ -0.91
RQC1YDR333C SPP41P38904 1435 aa9.36□□□□□ -0.91
RQC1YDR333C TRM732Q03496 1420 aa9.35□□□□□ -0.91
RQC1YDR333C CAB3P36076 571 aa9.33□□□□□ -0.92
RQC1YDR333C SPT6P23615 1451 aaKnown RBP9.33□□□□□ -0.92
RQC1YDR333C EBP2P36049 427 aaKnown RBP9.32□□□□□ -0.92
RQC1YDR333C IKI3Q06706 1349 aaKnown RBP9.32□□□□□ -0.92
RQC1YDR333C HIR3P47171 1648 aa9.27□□□□□ -0.93
RQC1YDR333C MON2P48563 1636 aaPredicted RBP9.25□□□□□ -0.93
RQC1YDR333C THO2P53552 1597 aaKnown RBP9.25□□□□□ -0.93
RQC1YDR333C STH1P32597 1359 aa9.25□□□□□ -0.93
RQC1YDR333C REV3P14284 1504 aa9.25□□□□□ -0.93
RQC1YDR333C STU1P38198 1513 aa9.25□□□□□ -0.93
RQC1YDR333C SIN3P22579 1536 aa9.24□□□□□ -0.93
RQC1YDR333C RQC2Q12532 1038 aaKnown RBP9.22□□□□□ -0.93
RQC1YDR333C POL5P39985 1022 aaKnown RBP9.22□□□□□ -0.93
RQC1YDR333C YTA7P40340 1379 aa9.21□□□□□ -0.94
RQC1YDR333C MYO2P19524 1574 aaKnown RBP9.21□□□□□ -0.94
RQC1YDR333C SSK2P53599 1579 aa9.21□□□□□ -0.94
RQC1YDR333C SAS10Q12136 610 aaPredicted RBP9.19□□□□□ -0.94
RQC1YDR333C NUP170P38181 1502 aa9.17□□□□□ -0.94
RQC1YDR333C YPR148CQ06523 435 aa9.17□□□□□ -0.94
RQC1YDR333C POL1P13382 1468 aa9.17□□□□□ -0.94
RQC1YDR333C SEC3P33332 1336 aaKnown RBP9.16□□□□□ -0.94
RQC1YDR333C SSM4P40318 1319 aa9.16□□□□□ -0.94
RQC1YDR333C SPT7P35177 1332 aa9.15□□□□□ -0.94
RQC1YDR333C ECM5Q03214 1411 aa9.15□□□□□ -0.95
RQC1YDR333C TAF2P23255 1407 aa9.14□□□□□ -0.95
RQC1YDR333C BPT1P14772 1559 aa9.11□□□□□ -0.95
RQC1YDR333C SCC2Q04002 1493 aa9.11□□□□□ -0.95
RQC1YDR333C PRS1P32895 427 aaKnown RBP9.09□□□□□ -0.95
RQC1YDR333C TFA1P36100 482 aa9.07□□□□□ -0.96
RQC1YDR333C ESP1Q03018 1630 aa9.06□□□□□ -0.96
RQC1YDR333C MYO4P32492 1471 aa9.02□□□□□ -0.97
RQC1YDR333C TAF7Q05021 590 aa8.99□□□□□ -0.97
RQC1YDR333C DNA2P38859 1522 aa8.99□□□□□ -0.97
RQC1YDR333C RTT106P40161 455 aa8.99□□□□□ -0.97
RQC1YDR333C SMC4Q12267 1418 aa8.98□□□□□ -0.97
RQC1YDR333C PDR10P51533 1564 aa8.97□□□□□ -0.97
RQC1YDR333C PEP1P32319 1579 aa8.96□□□□□ -0.98
RQC1YDR333C PAN1P32521 1480 aa8.96□□□□□ -0.98
RQC1YDR333C YOR1P53049 1477 aa8.96□□□□□ -0.98
RQC1YDR333C BUD4P47136 1447 aa8.95□□□□□ -0.98
RQC1YDR333C MLP2P40457 1679 aa8.94□□□□□ -0.98
RQC1YDR333C YPK9Q12697 1472 aa8.93□□□□□ -0.98
RQC1YDR333C SNQ2P32568 1501 aaKnown RBP8.92□□□□□ -0.98
RQC1YDR333C SRB8P25648 1427 aa8.91□□□□□ -0.98
RQC1YDR333C IME2P32581 645 aa8.9□□□□□ -0.98
RQC1YDR333C RKR1Q04781 1562 aa8.9□□□□□ -0.99
RQC1YDR333C YLR419WQ06698 1435 aaKnown RBP8.89□□□□□ -0.99
RQC1YDR333C CLC1P17891 233 aa8.89□□□□□ -0.99
RQC1YDR333C TSC11P40061 1430 aa8.89□□□□□ -0.99
RQC1YDR333C SWR1Q05471 1514 aa8.88□□□□□ -0.99
RQC1YDR333C YCF1P39109 1515 aaKnown RBP8.87□□□□□ -0.99
RQC1YDR333C GEA1P47102 1408 aaPredicted RBP8.86□□□□□ -0.99
RQC1YDR333C SIS2P36024 562 aa8.86□□□□□ -0.99
RQC1YDR333C TCB2P48231 1178 aa8.85□□□□□ -0.99
RQC1YDR333C CFT1Q06632 1357 aaKnown RBP8.85□□□□□ -0.99
RQC1YDR333C LEU3P08638 886 aa8.82□□□□□ -1
RQC1YDR333C KOG1P38873 1557 aa8.81□□□□□ -1
RQC1YDR333C OPY1P38271 328 aa8.8□□□□□ -1
RQC1YDR333C IFH1P39520 1085 aa8.8□□□□□ -1
RQC1YDR333C PDR15Q04182 1529 aaKnown RBP8.8□□□□□ -1
RQC1YDR333C PSD2P53037 1138 aaKnown RBP8.79□□□□□ -1
RQC1YDR333C MNN4P36044 1178 aa8.76□□□□□ -1.01
RQC1YDR333C YFR016CP43597 1233 aaKnown RBP8.76□□□□□ -1.01
RQC1YDR333C TOP2P06786 1428 aaKnown RBP8.76□□□□□ -1.01
RQC1YDR333C RPC31P17890 251 aa8.76□□□□□ -1.01
RQC1YDR333C ATG2P53855 1592 aa8.76□□□□□ -1.01
RQC1YDR333C MHP1P43638 1398 aa8.75□□□□□ -1.01
RQC1YDR333C RPO31P04051 1460 aa8.75□□□□□ -1.01
RQC1YDR333C NUP159P40477 1460 aa8.74□□□□□ -1.01
RQC1YDR333C EAF7P53911 425 aaKnown RBP8.74□□□□□ -1.01
RQC1YDR333C TY3B-GQ99315 1547 aa8.72□□□□□ -1.01
RQC1YDR333C VPS15P22219 1454 aa8.72□□□□□ -1.01
RQC1YDR333C ULS1Q08562 1619 aa8.71□□□□□ -1.01
RQC1YDR333C IRC20Q06554 1556 aa8.7□□□□□ -1.02
RQC1YDR333C SNF7P39929 240 aaKnown RBP8.67□□□□□ -1.02
RQC1YDR333C URN1Q06525 465 aaKnown RBP8.67□□□□□ -1.02
RQC1YDR333C DNF1P32660 1571 aa8.67□□□□□ -1.02
RQC1YDR333C MTC1P47018 478 aaKnown RBP8.66□□□□□ -1.02
RQC1YDR333C ESC1Q03661 1658 aaKnown RBP8.64□□□□□ -1.03
RQC1YDR333C LEO1P38439 464 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms