RNA–Protein interactions for RNA: YER125W

RSP5, Transcript of E3 ubiquitin ligase of NEDD4 family, yeastyeast

Gene RSP5, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSP5YER125W BFR2Q06631 534 aaKnown RBP10.12□□□□□ -0.79
RSP5YER125W NOP2P40991 618 aaKnown RBP9.84□□□□□ -0.83
RSP5YER125W RQC2Q12532 1038 aaKnown RBP9.7□□□□□ -0.86
RSP5YER125W SPA2P23201 1466 aaKnown RBP9.68□□□□□ -0.86
RSP5YER125W NSR1P27476 414 aaKnown RBP RIP-Chip data9.64□□□□□ -0.87not detected
RSP5YER125W SGS1P35187 1447 aa9.57□□□□□ -0.88
RSP5YER125W SSN2P38931 1420 aa9.55□□□□□ -0.88
RSP5YER125W SKI3P17883 1432 aaKnown RBP9.44□□□□□ -0.9
RSP5YER125W EBP2P36049 427 aaKnown RBP9.34□□□□□ -0.91
RSP5YER125W CAB3P36076 571 aa9.33□□□□□ -0.92
RSP5YER125W DRS1P32892 752 aaKnown RBP9.33□□□□□ -0.92
RSP5YER125W YPR148CQ06523 435 aa9.18□□□□□ -0.94
RSP5YER125W RSE1Q04693 1361 aaKnown RBP9.09□□□□□ -0.95
RSP5YER125W SIS2P36024 562 aa8.99□□□□□ -0.97
RSP5YER125W ENP1P38333 483 aaKnown RBP8.99□□□□□ -0.97
RSP5YER125W MMS22Q06164 1454 aa8.99□□□□□ -0.97
RSP5YER125W INO80P53115 1489 aa8.95□□□□□ -0.98
RSP5YER125W TCB3Q03640 1545 aaKnown RBP8.93□□□□□ -0.98
RSP5YER125W URN1Q06525 465 aaKnown RBP8.92□□□□□ -0.98
RSP5YER125W UFD4P33202 1483 aa8.88□□□□□ -0.99
RSP5YER125W CHD1P32657 1468 aa8.87□□□□□ -0.99
RSP5YER125W SPT7P35177 1332 aa8.83□□□□□ -1
RSP5YER125W TAF7Q05021 590 aa8.83□□□□□ -1
RSP5YER125W XRN1P22147 1528 aaKnown RBP8.82□□□□□ -1
RSP5YER125W AVT3P36062 692 aa8.82□□□□□ -1
RSP5YER125W STH1P32597 1359 aa8.79□□□□□ -1
RSP5YER125W POL5P39985 1022 aaKnown RBP8.78□□□□□ -1
RSP5YER125W TRM732Q03496 1420 aa8.76□□□□□ -1.01
RSP5YER125W MON2P48563 1636 aaPredicted RBP8.76□□□□□ -1.01
RSP5YER125W PRS1P32895 427 aaKnown RBP8.74□□□□□ -1.01
RSP5YER125W SAS10Q12136 610 aaPredicted RBP8.73□□□□□ -1.01
RSP5YER125W SPP41P38904 1435 aa8.72□□□□□ -1.01
RSP5YER125W IKI3Q06706 1349 aaKnown RBP8.69□□□□□ -1.02
RSP5YER125W TCB2P48231 1178 aa8.68□□□□□ -1.02
RSP5YER125W CLC1P17891 233 aa8.68□□□□□ -1.02
RSP5YER125W IME2P32581 645 aa8.66□□□□□ -1.02
RSP5YER125W LEO1P38439 464 aa8.65□□□□□ -1.02
RSP5YER125W LEU3P08638 886 aa8.65□□□□□ -1.02
RSP5YER125W YFR016CP43597 1233 aaKnown RBP8.64□□□□□ -1.03
RSP5YER125W SEC3P33332 1336 aaKnown RBP8.63□□□□□ -1.03
RSP5YER125W SSM4P40318 1319 aa8.63□□□□□ -1.03
RSP5YER125W CFT1Q06632 1357 aaKnown RBP8.62□□□□□ -1.03
RSP5YER125W ECM5Q03214 1411 aa8.62□□□□□ -1.03
RSP5YER125W MNN4P36044 1178 aa8.62□□□□□ -1.03
RSP5YER125W TFA1P36100 482 aa8.6□□□□□ -1.03
RSP5YER125W RTT106P40161 455 aa8.6□□□□□ -1.03
RSP5YER125W MYO2P19524 1574 aaKnown RBP8.6□□□□□ -1.03
RSP5YER125W AIM44Q99299 758 aa8.55□□□□□ -1.04
RSP5YER125W OPY1P38271 328 aa8.55□□□□□ -1.04
RSP5YER125W PDR10P51533 1564 aa8.54□□□□□ -1.04
RSP5YER125W FUN12P39730 1002 aaKnown RBP8.52□□□□□ -1.05
RSP5YER125W CWC22P53333 577 aaKnown RBP8.51□□□□□ -1.05
RSP5YER125W RPC31P17890 251 aa8.5□□□□□ -1.05
RSP5YER125W EAF7P53911 425 aaKnown RBP8.5□□□□□ -1.05
RSP5YER125W HSL1P34244 1518 aa8.49□□□□□ -1.05
RSP5YER125W STU1P38198 1513 aa8.49□□□□□ -1.05
RSP5YER125W BUD4P47136 1447 aa8.49□□□□□ -1.05
RSP5YER125W BPT1P14772 1559 aa8.47□□□□□ -1.05
RSP5YER125W TY1B-DR4Q07793 1604 aa8.47□□□□□ -1.05
RSP5YER125W PSD2P53037 1138 aaKnown RBP8.46□□□□□ -1.05
RSP5YER125W TAF2P23255 1407 aa8.46□□□□□ -1.05
RSP5YER125W SCC2Q04002 1493 aa8.46□□□□□ -1.05
RSP5YER125W SRB8P25648 1427 aa8.44□□□□□ -1.06
RSP5YER125W NUP170P38181 1502 aa8.44□□□□□ -1.06
RSP5YER125W SPT6P23615 1451 aaKnown RBP8.44□□□□□ -1.06
RSP5YER125W PEP1P32319 1579 aa8.44□□□□□ -1.06
RSP5YER125W FPR3P38911 411 aaKnown RBP8.42□□□□□ -1.06
RSP5YER125W RPS0BP46654 252 aaKnown RBP8.42□□□□□ -1.06
RSP5YER125W YTA7P40340 1379 aa8.41□□□□□ -1.06
RSP5YER125W THO2P53552 1597 aaKnown RBP8.41□□□□□ -1.06
RSP5YER125W REV3P14284 1504 aa8.41□□□□□ -1.06
RSP5YER125W HIR3P47171 1648 aa8.4□□□□□ -1.06
RSP5YER125W SPT21P35209 758 aa8.4□□□□□ -1.07
RSP5YER125W SNF7P39929 240 aaKnown RBP8.4□□□□□ -1.07
RSP5YER125W MLP2P40457 1679 aa8.39□□□□□ -1.07
RSP5YER125W YGR130CP53278 816 aa8.38□□□□□ -1.07
RSP5YER125W YLR419WQ06698 1435 aaKnown RBP8.37□□□□□ -1.07
RSP5YER125W TOP2P06786 1428 aaKnown RBP8.36□□□□□ -1.07
RSP5YER125W SSK2P53599 1579 aa8.36□□□□□ -1.07
RSP5YER125W PAN1P32521 1480 aa8.36□□□□□ -1.07
RSP5YER125W QCR6P00127 147 aa8.35□□□□□ -1.07
RSP5YER125W POL1P13382 1468 aa8.34□□□□□ -1.07
RSP5YER125W ENV11P53246 860 aa8.33□□□□□ -1.08
RSP5YER125W ROX1P25042 368 aa8.32□□□□□ -1.08
RSP5YER125W DJP1P40564 432 aa8.31□□□□□ -1.08
RSP5YER125W SIN3P22579 1536 aa8.3□□□□□ -1.08
RSP5YER125W PAF1P38351 445 aa8.3□□□□□ -1.08
RSP5YER125W IFH1P39520 1085 aa8.3□□□□□ -1.08
RSP5YER125W SLN1P39928 1220 aaPredicted RBP8.29□□□□□ -1.08
RSP5YER125W ORC1P54784 914 aaPredicted RBP8.29□□□□□ -1.08
RSP5YER125W CTR9P89105 1077 aa8.28□□□□□ -1.08
RSP5YER125W ESP1Q03018 1630 aa8.28□□□□□ -1.08
RSP5YER125W MMS1Q06211 1407 aa8.27□□□□□ -1.08
RSP5YER125W NAP1P25293 417 aaKnown RBP8.27□□□□□ -1.09
RSP5YER125W MTC1P47018 478 aaKnown RBP8.27□□□□□ -1.09
RSP5YER125W SMC4Q12267 1418 aa8.26□□□□□ -1.09
RSP5YER125W YCF1P39109 1515 aaKnown RBP8.26□□□□□ -1.09
RSP5YER125W NOP53Q12080 455 aaKnown RBP8.25□□□□□ -1.09
RSP5YER125W TSC11P40061 1430 aa8.25□□□□□ -1.09
RSP5YER125W NUG1P40010 520 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms