Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RIPPLY3P57055 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPPLY3P57055 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RIPPLY3P57055 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RIPPLY3P57055 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.76■□□□□ 0.91
RIPPLY3P57055 AC133561.4-201ENST00000566112 224 ntBASIC20.76■□□□□ 0.91
RIPPLY3P57055 AC110285.6-201ENST00000617652 491 ntBASIC20.76■□□□□ 0.91
RIPPLY3P57055 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPPLY3P57055 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPPLY3P57055 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.75■□□□□ 0.91
RIPPLY3P57055 LONRF2P2-201ENST00000439212 571 ntBASIC20.75■□□□□ 0.91
RIPPLY3P57055 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.75■□□□□ 0.91
RIPPLY3P57055 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RIPPLY3P57055 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.75■□□□□ 0.91
RIPPLY3P57055 ZNRF2P3-201ENST00000424200 374 ntBASIC20.74■□□□□ 0.91
RIPPLY3P57055 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.74■□□□□ 0.91
RIPPLY3P57055 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPPLY3P57055 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.73■□□□□ 0.91
RIPPLY3P57055 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIPPLY3P57055 KRT16P3-201ENST00000439127 1283 ntBASIC20.72■□□□□ 0.91
RIPPLY3P57055 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.72■□□□□ 0.91
RIPPLY3P57055 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIPPLY3P57055 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIPPLY3P57055 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIPPLY3P57055 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RIPPLY3P57055 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.71■□□□□ 0.91
RIPPLY3P57055 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIPPLY3P57055 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIPPLY3P57055 AC120057.4-201ENST00000624722 1615 ntBASIC20.71■□□□□ 0.91
RIPPLY3P57055 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPPLY3P57055 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.7■□□□□ 0.9
RIPPLY3P57055 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
RIPPLY3P57055 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIPPLY3P57055 AL157400.5-201ENST00000507624 621 ntBASIC20.7■□□□□ 0.9
RIPPLY3P57055 KRT125P-201ENST00000546827 989 ntBASIC20.7■□□□□ 0.9
RIPPLY3P57055 AC135279.3-201ENST00000610945 1311 ntBASIC20.7■□□□□ 0.9
RIPPLY3P57055 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.7■□□□□ 0.9
RIPPLY3P57055 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPPLY3P57055 SMPD5-203ENST00000639008 1464 ntBASIC20.69■□□□□ 0.9
RIPPLY3P57055 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIPPLY3P57055 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.69■□□□□ 0.9
RIPPLY3P57055 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.69■□□□□ 0.9
RIPPLY3P57055 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.69■□□□□ 0.9
RIPPLY3P57055 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPPLY3P57055 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.69■□□□□ 0.9
RIPPLY3P57055 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPPLY3P57055 MIR219A2-201ENST00000608502 1504 ntBASIC20.68■□□□□ 0.9
RIPPLY3P57055 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPPLY3P57055 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
RIPPLY3P57055 AL136116.3-201ENST00000402907 1138 ntBASIC20.68■□□□□ 0.9
RIPPLY3P57055 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.68■□□□□ 0.9
RIPPLY3P57055 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.68■□□□□ 0.9
RIPPLY3P57055 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIPPLY3P57055 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPPLY3P57055 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPPLY3P57055 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPPLY3P57055 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.67■□□□□ 0.9
RIPPLY3P57055 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.67■□□□□ 0.9
RIPPLY3P57055 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.67■□□□□ 0.9
RIPPLY3P57055 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RIPPLY3P57055 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPPLY3P57055 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPPLY3P57055 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPPLY3P57055 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.66■□□□□ 0.9
RIPPLY3P57055 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPPLY3P57055 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.66■□□□□ 0.9
RIPPLY3P57055 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPPLY3P57055 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.66■□□□□ 0.9
RIPPLY3P57055 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.66■□□□□ 0.9
RIPPLY3P57055 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPPLY3P57055 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPPLY3P57055 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPPLY3P57055 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPPLY3P57055 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPPLY3P57055 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPPLY3P57055 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPPLY3P57055 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.65■□□□□ 0.9
RIPPLY3P57055 AC131281.2-201ENST00000520478 145 ntBASIC20.65■□□□□ 0.9
RIPPLY3P57055 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
RIPPLY3P57055 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPPLY3P57055 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPPLY3P57055 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RIPPLY3P57055 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPPLY3P57055 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.63■□□□□ 0.89
RIPPLY3P57055 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPPLY3P57055 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.63■□□□□ 0.89
RIPPLY3P57055 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.63■□□□□ 0.89
RIPPLY3P57055 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
RIPPLY3P57055 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPPLY3P57055 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.62■□□□□ 0.89
RIPPLY3P57055 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.62■□□□□ 0.89
RIPPLY3P57055 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RIPPLY3P57055 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RIPPLY3P57055 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RIPPLY3P57055 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RIPPLY3P57055 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPPLY3P57055 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RIPPLY3P57055 AC096631.2-201ENST00000436136 790 ntBASIC20.61■□□□□ 0.89
RIPPLY3P57055 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.61■□□□□ 0.89
RIPPLY3P57055 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms