Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNCAP37840 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.3■□□□□ 0.84
SNCAP37840 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNCAP37840 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SNCAP37840 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.3■□□□□ 0.84
SNCAP37840 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNCAP37840 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNCAP37840 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.29■□□□□ 0.84
SNCAP37840 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SNCAP37840 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNCAP37840 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNCAP37840 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNCAP37840 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNCAP37840 AC100797.4-201ENST00000631653 1827 ntBASIC20.28■□□□□ 0.84
SNCAP37840 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.28■□□□□ 0.84
SNCAP37840 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SNCAP37840 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNCAP37840 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNCAP37840 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNCAP37840 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNCAP37840 AC145676.1-201ENST00000514988 2004 ntBASIC20.27■□□□□ 0.84
SNCAP37840 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNCAP37840 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNCAP37840 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.26■□□□□ 0.83
SNCAP37840 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.26■□□□□ 0.83
SNCAP37840 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNCAP37840 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNCAP37840 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNCAP37840 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNCAP37840 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNCAP37840 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNCAP37840 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNCAP37840 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SNCAP37840 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SNCAP37840 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNCAP37840 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNCAP37840 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SNCAP37840 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNCAP37840 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.24■□□□□ 0.83
SNCAP37840 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNCAP37840 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SNCAP37840 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SNCAP37840 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.23■□□□□ 0.83
SNCAP37840 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNCAP37840 AC005559.1-201ENST00000589661 871 ntBASIC20.23■□□□□ 0.83
SNCAP37840 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNCAP37840 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNCAP37840 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNCAP37840 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.22■□□□□ 0.83
SNCAP37840 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
SNCAP37840 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.22■□□□□ 0.83
SNCAP37840 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SNCAP37840 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNCAP37840 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNCAP37840 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNCAP37840 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SNCAP37840 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.21■□□□□ 0.83
SNCAP37840 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNCAP37840 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNCAP37840 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.21■□□□□ 0.83
SNCAP37840 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNCAP37840 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.2■□□□□ 0.82
SNCAP37840 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNCAP37840 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNCAP37840 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNCAP37840 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNCAP37840 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNCAP37840 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.2■□□□□ 0.82
SNCAP37840 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.2■□□□□ 0.82
SNCAP37840 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNCAP37840 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNCAP37840 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SNCAP37840 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNCAP37840 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.19■□□□□ 0.82
SNCAP37840 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNCAP37840 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNCAP37840 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.19■□□□□ 0.82
SNCAP37840 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.18■□□□□ 0.82
SNCAP37840 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNCAP37840 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNCAP37840 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNCAP37840 AP002414.2-202ENST00000590929 1450 ntBASIC20.18■□□□□ 0.82
SNCAP37840 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNCAP37840 AC108673.1-201ENST00000510422 1159 ntBASIC20.18■□□□□ 0.82
SNCAP37840 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNCAP37840 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.18■□□□□ 0.82
SNCAP37840 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNCAP37840 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNCAP37840 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.17■□□□□ 0.82
SNCAP37840 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNCAP37840 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
SNCAP37840 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.17■□□□□ 0.82
SNCAP37840 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.17■□□□□ 0.82
SNCAP37840 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SNCAP37840 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.17■□□□□ 0.82
SNCAP37840 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.16■□□□□ 0.82
SNCAP37840 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNCAP37840 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNCAP37840 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNCAP37840 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms