Protein–RNA interactions for Protein: P28072

PSMB6, Proteasome subunit beta type-6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6P28072 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB6P28072 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB6P28072 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.68■□□□□ 0.9
PSMB6P28072 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB6P28072 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB6P28072 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PSMB6P28072 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB6P28072 DUSP8P4-201ENST00000399538 1761 ntBASIC20.67■□□□□ 0.9
PSMB6P28072 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB6P28072 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB6P28072 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB6P28072 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PSMB6P28072 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB6P28072 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.66■□□□□ 0.9
PSMB6P28072 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB6P28072 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB6P28072 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB6P28072 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB6P28072 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSMB6P28072 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
PSMB6P28072 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSMB6P28072 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.65■□□□□ 0.9
PSMB6P28072 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.65■□□□□ 0.9
PSMB6P28072 AC100797.4-201ENST00000631653 1827 ntBASIC20.64■□□□□ 0.9
PSMB6P28072 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PSMB6P28072 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PSMB6P28072 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSMB6P28072 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PSMB6P28072 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.63■□□□□ 0.89
PSMB6P28072 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMB6P28072 MIR762-201ENST00000390236 83 ntBASIC20.63■□□□□ 0.89
PSMB6P28072 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMB6P28072 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.63■□□□□ 0.89
PSMB6P28072 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMB6P28072 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMB6P28072 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMB6P28072 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMB6P28072 AP002414.2-202ENST00000590929 1450 ntBASIC20.62■□□□□ 0.89
PSMB6P28072 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PSMB6P28072 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMB6P28072 SUZ12P1-203ENST00000578195 985 ntBASIC20.62■□□□□ 0.89
PSMB6P28072 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMB6P28072 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMB6P28072 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PSMB6P28072 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PSMB6P28072 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.61■□□□□ 0.89
PSMB6P28072 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.61■□□□□ 0.89
PSMB6P28072 AC092803.2-201ENST00000564287 1899 ntBASIC20.6■□□□□ 0.89
PSMB6P28072 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.6■□□□□ 0.89
PSMB6P28072 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMB6P28072 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.6■□□□□ 0.89
PSMB6P28072 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.6■□□□□ 0.89
PSMB6P28072 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PSMB6P28072 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMB6P28072 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMB6P28072 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMB6P28072 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.58■□□□□ 0.89
PSMB6P28072 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PSMB6P28072 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSMB6P28072 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.58■□□□□ 0.88
PSMB6P28072 AC127502.1-201ENST00000399971 1502 ntBASIC20.58■□□□□ 0.88
PSMB6P28072 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PSMB6P28072 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMB6P28072 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMB6P28072 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PSMB6P28072 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMB6P28072 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSMB6P28072 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.57■□□□□ 0.88
PSMB6P28072 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.57■□□□□ 0.88
PSMB6P28072 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMB6P28072 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PSMB6P28072 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSMB6P28072 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSMB6P28072 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSMB6P28072 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.56■□□□□ 0.88
PSMB6P28072 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSMB6P28072 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSMB6P28072 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB6P28072 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSMB6P28072 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.55■□□□□ 0.88
PSMB6P28072 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PSMB6P28072 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.55■□□□□ 0.88
PSMB6P28072 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PSMB6P28072 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB6P28072 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PSMB6P28072 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB6P28072 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.54■□□□□ 0.88
PSMB6P28072 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.54■□□□□ 0.88
PSMB6P28072 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PSMB6P28072 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSMB6P28072 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PSMB6P28072 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB6P28072 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB6P28072 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB6P28072 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSMB6P28072 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PSMB6P28072 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PSMB6P28072 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PSMB6P28072 AC005559.1-201ENST00000589661 871 ntBASIC20.52■□□□□ 0.88
PSMB6P28072 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms