Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB4AP20338 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB4AP20338 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.89■□□□□ 0.62
RAB4AP20338 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB4AP20338 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB4AP20338 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB4AP20338 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RAB4AP20338 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB4AP20338 AC020928.2-201ENST00000588717 2197 ntBASIC18.88■□□□□ 0.61
RAB4AP20338 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB4AP20338 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB4AP20338 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.88■□□□□ 0.61
RAB4AP20338 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB4AP20338 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB4AP20338 AC012676.1-201ENST00000574705 1949 ntBASIC18.88■□□□□ 0.61
RAB4AP20338 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.88■□□□□ 0.61
RAB4AP20338 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB4AP20338 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB4AP20338 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB4AP20338 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB4AP20338 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB4AP20338 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.87■□□□□ 0.61
RAB4AP20338 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RAB4AP20338 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB4AP20338 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB4AP20338 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB4AP20338 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB4AP20338 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB4AP20338 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB4AP20338 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB4AP20338 AC079834.2-201ENST00000609776 1949 ntBASIC18.85■□□□□ 0.61
RAB4AP20338 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB4AP20338 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB4AP20338 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB4AP20338 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB4AP20338 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB4AP20338 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB4AP20338 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB4AP20338 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB4AP20338 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RAB4AP20338 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB4AP20338 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
RAB4AP20338 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.83■□□□□ 0.61
RAB4AP20338 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB4AP20338 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB4AP20338 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB4AP20338 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB4AP20338 DYNLL1-208ENST00000550178 581 ntBASIC18.83■□□□□ 0.6
RAB4AP20338 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB4AP20338 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RAB4AP20338 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB4AP20338 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB4AP20338 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RAB4AP20338 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB4AP20338 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB4AP20338 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB4AP20338 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB4AP20338 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB4AP20338 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB4AP20338 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RAB4AP20338 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB4AP20338 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RAB4AP20338 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB4AP20338 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB4AP20338 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB4AP20338 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
RAB4AP20338 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB4AP20338 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB4AP20338 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
RAB4AP20338 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB4AP20338 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB4AP20338 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RAB4AP20338 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB4AP20338 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB4AP20338 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB4AP20338 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB4AP20338 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB4AP20338 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAB4AP20338 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB4AP20338 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB4AP20338 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAB4AP20338 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB4AP20338 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB4AP20338 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB4AP20338 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB4AP20338 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RAB4AP20338 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB4AP20338 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB4AP20338 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB4AP20338 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms