Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEFA4P12838 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.05■□□□□ 0.8
DEFA4P12838 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.05■□□□□ 0.8
DEFA4P12838 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
DEFA4P12838 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.05■□□□□ 0.8
DEFA4P12838 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
DEFA4P12838 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.05■□□□□ 0.8
DEFA4P12838 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
DEFA4P12838 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA4P12838 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA4P12838 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEFA4P12838 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DEFA4P12838 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA4P12838 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA4P12838 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.03■□□□□ 0.8
DEFA4P12838 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA4P12838 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DEFA4P12838 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
DEFA4P12838 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.02■□□□□ 0.8
DEFA4P12838 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
DEFA4P12838 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.02■□□□□ 0.8
DEFA4P12838 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.02■□□□□ 0.79
DEFA4P12838 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
DEFA4P12838 AP002414.2-202ENST00000590929 1450 ntBASIC20.01■□□□□ 0.79
DEFA4P12838 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEFA4P12838 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEFA4P12838 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.01■□□□□ 0.79
DEFA4P12838 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DEFA4P12838 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DEFA4P12838 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DEFA4P12838 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
DEFA4P12838 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DEFA4P12838 DUX4L29-201ENST00000425409 679 ntBASIC20■□□□□ 0.79
DEFA4P12838 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DEFA4P12838 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DEFA4P12838 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEFA4P12838 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEFA4P12838 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEFA4P12838 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEFA4P12838 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.99■□□□□ 0.79
DEFA4P12838 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
DEFA4P12838 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
DEFA4P12838 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEFA4P12838 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEFA4P12838 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DEFA4P12838 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.97■□□□□ 0.79
DEFA4P12838 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.97■□□□□ 0.79
DEFA4P12838 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.97■□□□□ 0.79
DEFA4P12838 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DEFA4P12838 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEFA4P12838 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEFA4P12838 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEFA4P12838 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEFA4P12838 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEFA4P12838 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
DEFA4P12838 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
DEFA4P12838 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEFA4P12838 RPS2P35-201ENST00000443417 897 ntBASIC19.95■□□□□ 0.78
DEFA4P12838 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DEFA4P12838 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DEFA4P12838 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEFA4P12838 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEFA4P12838 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEFA4P12838 AC021231.2-201ENST00000594613 730 ntBASIC19.93■□□□□ 0.78
DEFA4P12838 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEFA4P12838 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
DEFA4P12838 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DEFA4P12838 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DEFA4P12838 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DEFA4P12838 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.92■□□□□ 0.78
DEFA4P12838 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DEFA4P12838 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DEFA4P12838 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DEFA4P12838 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DEFA4P12838 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DEFA4P12838 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DEFA4P12838 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DEFA4P12838 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
DEFA4P12838 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.91■□□□□ 0.78
DEFA4P12838 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DEFA4P12838 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
DEFA4P12838 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.91■□□□□ 0.78
DEFA4P12838 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DEFA4P12838 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DEFA4P12838 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DEFA4P12838 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DEFA4P12838 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DEFA4P12838 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DEFA4P12838 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DEFA4P12838 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DEFA4P12838 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DEFA4P12838 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.88■□□□□ 0.77
DEFA4P12838 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
DEFA4P12838 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DEFA4P12838 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.88■□□□□ 0.77
DEFA4P12838 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
DEFA4P12838 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DEFA4P12838 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DEFA4P12838 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DEFA4P12838 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 470.2 ms