Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CHD2O14647 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC35.72■■■■□ 3.31
CHD2O14647 GUSBP5-201ENST00000418136 578 ntBASIC35.71■■■■□ 3.31
CHD2O14647 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CHD2O14647 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CHD2O14647 HES6-204ENST00000409182 863 ntTSL 2 BASIC35.71■■■■□ 3.31
CHD2O14647 AC010980.1-201ENST00000587192 1142 ntBASIC35.71■■■■□ 3.31
CHD2O14647 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
CHD2O14647 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC35.7■■■■□ 3.3
CHD2O14647 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CHD2O14647 PVT1_1.1-201ENST00000615125 194 ntBASIC35.69■■■■□ 3.3
CHD2O14647 KRT8P33-201ENST00000508125 1423 ntBASIC35.69■■■■□ 3.3
CHD2O14647 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC35.69■■■■□ 3.3
CHD2O14647 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC35.69■■■■□ 3.3
CHD2O14647 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC35.69■■■■□ 3.3
CHD2O14647 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC35.68■■■■□ 3.3
CHD2O14647 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
CHD2O14647 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC35.67■■■■□ 3.3
CHD2O14647 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC35.67■■■■□ 3.3
CHD2O14647 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC35.67■■■■□ 3.3
CHD2O14647 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CHD2O14647 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CHD2O14647 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CHD2O14647 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CHD2O14647 MIR4508-201ENST00000584178 70 ntBASIC35.66■■■■□ 3.3
CHD2O14647 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CHD2O14647 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CHD2O14647 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CHD2O14647 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC35.64■■■■□ 3.3
CHD2O14647 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC35.64■■■■□ 3.3
CHD2O14647 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC35.63■■■■□ 3.29
CHD2O14647 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CHD2O14647 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CHD2O14647 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CHD2O14647 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
CHD2O14647 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC35.62■■■■□ 3.29
CHD2O14647 RP9P-202ENST00000450133 1212 ntBASIC35.62■■■■□ 3.29
CHD2O14647 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC35.61■■■■□ 3.29
CHD2O14647 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CHD2O14647 AC103834.1-201ENST00000520383 144 ntBASIC35.61■■■■□ 3.29
CHD2O14647 AC074183.2-201ENST00000623112 922 ntBASIC35.61■■■■□ 3.29
CHD2O14647 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC35.61■■■■□ 3.29
CHD2O14647 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
CHD2O14647 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CHD2O14647 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
CHD2O14647 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC35.58■■■■□ 3.29
CHD2O14647 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC35.57■■■■□ 3.29
CHD2O14647 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC35.57■■■■□ 3.29
CHD2O14647 THA1P-201ENST00000590384 1145 ntBASIC35.57■■■■□ 3.29
CHD2O14647 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC35.57■■■■□ 3.28
CHD2O14647 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC35.57■■■■□ 3.28
CHD2O14647 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC35.57■■■■□ 3.28
CHD2O14647 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC35.57■■■■□ 3.28
CHD2O14647 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC35.56■■■■□ 3.28
CHD2O14647 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC35.56■■■■□ 3.28
CHD2O14647 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC35.56■■■■□ 3.28
CHD2O14647 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC35.55■■■■□ 3.28
CHD2O14647 MIR6765-201ENST00000614092 87 ntBASIC35.55■■■■□ 3.28
CHD2O14647 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CHD2O14647 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CHD2O14647 OR2A1-AS1-204ENST00000470435 602 ntBASIC35.55■■■■□ 3.28
CHD2O14647 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC35.55■■■■□ 3.28
CHD2O14647 AC103724.3-201ENST00000564481 992 ntBASIC35.55■■■■□ 3.28
CHD2O14647 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
CHD2O14647 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC35.54■■■■□ 3.28
CHD2O14647 AC139795.1-202ENST00000500444 432 ntBASIC35.54■■■■□ 3.28
CHD2O14647 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC35.54■■■■□ 3.28
CHD2O14647 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC35.53■■■■□ 3.28
CHD2O14647 AL359258.2-201ENST00000564063 1566 ntBASIC35.53■■■■□ 3.28
CHD2O14647 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
CHD2O14647 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC35.53■■■■□ 3.28
CHD2O14647 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC35.52■■■■□ 3.28
CHD2O14647 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
CHD2O14647 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CHD2O14647 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CHD2O14647 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC35.51■■■■□ 3.28
CHD2O14647 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC35.51■■■■□ 3.28
CHD2O14647 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC35.5■■■■□ 3.27
CHD2O14647 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CHD2O14647 PFN2-211ENST00000489155 636 ntTSL 4 BASIC35.49■■■■□ 3.27
CHD2O14647 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC35.49■■■■□ 3.27
CHD2O14647 BHLHE23-202ENST00000612929 1109 ntBASIC35.49■■■■□ 3.27
CHD2O14647 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
CHD2O14647 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC35.48■■■■□ 3.27
CHD2O14647 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC35.48■■■■□ 3.27
CHD2O14647 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC35.48■■■■□ 3.27
CHD2O14647 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC35.48■■■■□ 3.27
CHD2O14647 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC35.48■■■■□ 3.27
CHD2O14647 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CHD2O14647 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC35.47■■■■□ 3.27
CHD2O14647 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC35.47■■■■□ 3.27
CHD2O14647 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC35.47■■■■□ 3.27
CHD2O14647 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CHD2O14647 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CHD2O14647 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
CHD2O14647 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC35.46■■■■□ 3.27
CHD2O14647 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC35.46■■■■□ 3.27
CHD2O14647 HYI-210ENST00000486909 905 ntTSL 5 BASIC35.46■■■■□ 3.27
CHD2O14647 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC35.45■■■■□ 3.27
CHD2O14647 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC35.44■■■■□ 3.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms