Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SOX1O00570 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.39■■□□□ 1.98
SOX1O00570 AL139246.5-201ENST00000606645 996 ntBASIC27.39■■□□□ 1.98
SOX1O00570 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SOX1O00570 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SOX1O00570 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SOX1O00570 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.38■■□□□ 1.97
SOX1O00570 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.38■■□□□ 1.97
SOX1O00570 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SOX1O00570 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SOX1O00570 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.37■■□□□ 1.97
SOX1O00570 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.37■■□□□ 1.97
SOX1O00570 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.37■■□□□ 1.97
SOX1O00570 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SOX1O00570 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
SOX1O00570 AC127502.1-201ENST00000399971 1502 ntBASIC27.36■■□□□ 1.97
SOX1O00570 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SOX1O00570 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SOX1O00570 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SOX1O00570 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.36■■□□□ 1.97
SOX1O00570 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.36■■□□□ 1.97
SOX1O00570 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SOX1O00570 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SOX1O00570 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SOX1O00570 RAP2CP1-202ENST00000605179 643 ntBASIC27.35■■□□□ 1.97
SOX1O00570 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
SOX1O00570 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SOX1O00570 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SOX1O00570 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.34■■□□□ 1.97
SOX1O00570 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.34■■□□□ 1.97
SOX1O00570 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.34■■□□□ 1.97
SOX1O00570 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SOX1O00570 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.34■■□□□ 1.97
SOX1O00570 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SOX1O00570 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.33■■□□□ 1.97
SOX1O00570 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SOX1O00570 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
SOX1O00570 NALT1-201ENST00000429224 738 ntTSL 5 BASIC27.33■■□□□ 1.97
SOX1O00570 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SOX1O00570 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SOX1O00570 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SOX1O00570 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SOX1O00570 AC093536.1-201ENST00000569153 554 ntBASIC27.31■■□□□ 1.96
SOX1O00570 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
SOX1O00570 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SOX1O00570 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SOX1O00570 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SOX1O00570 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SOX1O00570 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
SOX1O00570 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.3■■□□□ 1.96
SOX1O00570 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SOX1O00570 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.3■■□□□ 1.96
SOX1O00570 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SOX1O00570 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.3■■□□□ 1.96
SOX1O00570 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SOX1O00570 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.28■■□□□ 1.96
SOX1O00570 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
SOX1O00570 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SOX1O00570 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.26■■□□□ 1.95
SOX1O00570 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SOX1O00570 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SOX1O00570 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.25■■□□□ 1.95
SOX1O00570 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SOX1O00570 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SOX1O00570 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.24■■□□□ 1.95
SOX1O00570 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SOX1O00570 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SOX1O00570 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.23■■□□□ 1.95
SOX1O00570 Z92544.1-202ENST00000571933 1220 ntBASIC27.23■■□□□ 1.95
SOX1O00570 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
SOX1O00570 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
SOX1O00570 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.22■■□□□ 1.95
SOX1O00570 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SOX1O00570 AL161658.1-201ENST00000623641 1967 ntBASIC27.21■■□□□ 1.95
SOX1O00570 AC120057.4-201ENST00000624722 1615 ntBASIC27.21■■□□□ 1.95
SOX1O00570 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.21■■□□□ 1.95
SOX1O00570 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
SOX1O00570 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SOX1O00570 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.21■■□□□ 1.95
SOX1O00570 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SOX1O00570 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SOX1O00570 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.2■■□□□ 1.94
SOX1O00570 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.19■■□□□ 1.94
SOX1O00570 AC018755.3-202ENST00000596210 929 ntBASIC27.19■■□□□ 1.94
SOX1O00570 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SOX1O00570 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
SOX1O00570 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SOX1O00570 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SOX1O00570 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.16■■□□□ 1.94
SOX1O00570 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
SOX1O00570 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC27.16■■□□□ 1.94
SOX1O00570 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.16■■□□□ 1.94
SOX1O00570 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SOX1O00570 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
SOX1O00570 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SOX1O00570 UNC93B8-201ENST00000511903 705 ntBASIC27.14■■□□□ 1.94
SOX1O00570 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.14■■□□□ 1.94
SOX1O00570 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.14■■□□□ 1.94
SOX1O00570 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.14■■□□□ 1.94
SOX1O00570 RARRES2P6-201ENST00000567333 442 ntBASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms