Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01546A6NGU7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01546A6NGU7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01546A6NGU7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01546A6NGU7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01546A6NGU7 AC012676.1-201ENST00000574705 1949 ntBASIC17.74■□□□□ 0.43
LINC01546A6NGU7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01546A6NGU7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01546A6NGU7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01546A6NGU7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01546A6NGU7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01546A6NGU7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01546A6NGU7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01546A6NGU7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01546A6NGU7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01546A6NGU7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.73■□□□□ 0.43
LINC01546A6NGU7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01546A6NGU7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC01546A6NGU7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01546A6NGU7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01546A6NGU7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01546A6NGU7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01546A6NGU7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC01546A6NGU7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01546A6NGU7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LINC01546A6NGU7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01546A6NGU7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01546A6NGU7 AP004609.3-201ENST00000610705 1884 ntBASIC17.71■□□□□ 0.43
LINC01546A6NGU7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC01546A6NGU7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01546A6NGU7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01546A6NGU7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LINC01546A6NGU7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
LINC01546A6NGU7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
LINC01546A6NGU7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01546A6NGU7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01546A6NGU7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC01546A6NGU7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01546A6NGU7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.7■□□□□ 0.42
LINC01546A6NGU7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01546A6NGU7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01546A6NGU7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01546A6NGU7 AL139125.2-201ENST00000623134 1869 ntBASIC17.69■□□□□ 0.42
LINC01546A6NGU7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01546A6NGU7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
LINC01546A6NGU7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01546A6NGU7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01546A6NGU7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01546A6NGU7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01546A6NGU7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LINC01546A6NGU7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.68■□□□□ 0.42
LINC01546A6NGU7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LINC01546A6NGU7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01546A6NGU7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LINC01546A6NGU7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01546A6NGU7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01546A6NGU7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01546A6NGU7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC01546A6NGU7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LINC01546A6NGU7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01546A6NGU7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01546A6NGU7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01546A6NGU7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01546A6NGU7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01546A6NGU7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01546A6NGU7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01546A6NGU7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC01546A6NGU7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01546A6NGU7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01546A6NGU7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC01546A6NGU7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01546A6NGU7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01546A6NGU7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01546A6NGU7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LINC01546A6NGU7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LINC01546A6NGU7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01546A6NGU7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01546A6NGU7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01546A6NGU7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01546A6NGU7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LINC01546A6NGU7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01546A6NGU7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
LINC01546A6NGU7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01546A6NGU7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LINC01546A6NGU7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01546A6NGU7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01546A6NGU7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01546A6NGU7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC01546A6NGU7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01546A6NGU7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01546A6NGU7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01546A6NGU7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01546A6NGU7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01546A6NGU7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LINC01546A6NGU7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01546A6NGU7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01546A6NGU7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01546A6NGU7 AC133561.1-201ENST00000568600 2415 ntBASIC17.61■□□□□ 0.41
LINC01546A6NGU7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01546A6NGU7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms