Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.18■□□□□ 0.98
TMEM235A6NFC5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM235A6NFC5 MIR762-201ENST00000390236 83 ntBASIC21.18■□□□□ 0.98
TMEM235A6NFC5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.18■□□□□ 0.98
TMEM235A6NFC5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.18■□□□□ 0.98
TMEM235A6NFC5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM235A6NFC5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TMEM235A6NFC5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM235A6NFC5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.17■□□□□ 0.98
TMEM235A6NFC5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.17■□□□□ 0.98
TMEM235A6NFC5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM235A6NFC5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.17■□□□□ 0.98
TMEM235A6NFC5 DUSP8P4-201ENST00000399538 1761 ntBASIC21.17■□□□□ 0.98
TMEM235A6NFC5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
TMEM235A6NFC5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM235A6NFC5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM235A6NFC5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.17■□□□□ 0.98
TMEM235A6NFC5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM235A6NFC5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM235A6NFC5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.16■□□□□ 0.98
TMEM235A6NFC5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM235A6NFC5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM235A6NFC5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.16■□□□□ 0.98
TMEM235A6NFC5 AC097358.2-201ENST00000607541 1159 ntBASIC21.16■□□□□ 0.98
TMEM235A6NFC5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
TMEM235A6NFC5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM235A6NFC5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM235A6NFC5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM235A6NFC5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM235A6NFC5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM235A6NFC5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.15■□□□□ 0.98
TMEM235A6NFC5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TMEM235A6NFC5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM235A6NFC5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.15■□□□□ 0.98
TMEM235A6NFC5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TMEM235A6NFC5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TMEM235A6NFC5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM235A6NFC5 AP004609.3-201ENST00000610705 1884 ntBASIC21.13■□□□□ 0.97
TMEM235A6NFC5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM235A6NFC5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TMEM235A6NFC5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM235A6NFC5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TMEM235A6NFC5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TMEM235A6NFC5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM235A6NFC5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM235A6NFC5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.12■□□□□ 0.97
TMEM235A6NFC5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM235A6NFC5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TMEM235A6NFC5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM235A6NFC5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM235A6NFC5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM235A6NFC5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM235A6NFC5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM235A6NFC5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM235A6NFC5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEM235A6NFC5 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.1■□□□□ 0.97
TMEM235A6NFC5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM235A6NFC5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM235A6NFC5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.09■□□□□ 0.97
TMEM235A6NFC5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM235A6NFC5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM235A6NFC5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TMEM235A6NFC5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TMEM235A6NFC5 LINC00273-201ENST00000539813 1452 ntBASIC21.08■□□□□ 0.97
TMEM235A6NFC5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM235A6NFC5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM235A6NFC5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM235A6NFC5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM235A6NFC5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM235A6NFC5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM235A6NFC5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM235A6NFC5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM235A6NFC5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM235A6NFC5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM235A6NFC5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
TMEM235A6NFC5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM235A6NFC5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM235A6NFC5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM235A6NFC5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TMEM235A6NFC5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TMEM235A6NFC5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM235A6NFC5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM235A6NFC5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM235A6NFC5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.05■□□□□ 0.96
TMEM235A6NFC5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TMEM235A6NFC5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM235A6NFC5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM235A6NFC5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TMEM235A6NFC5 AC093323.1-202ENST00000635031 2045 ntBASIC21.04■□□□□ 0.96
TMEM235A6NFC5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM235A6NFC5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TMEM235A6NFC5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM235A6NFC5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.03■□□□□ 0.96
TMEM235A6NFC5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM235A6NFC5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM235A6NFC5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM235A6NFC5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM235A6NFC5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM235A6NFC5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM235A6NFC5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms