Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-2A0A0B4J237 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV8-2A0A0B4J237 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV8-2A0A0B4J237 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV8-2A0A0B4J237 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV8-2A0A0B4J237 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.85■□□□□ 0.61
TRAV8-2A0A0B4J237 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 DUX4L29-201ENST00000425409 679 ntBASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRAV8-2A0A0B4J237 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV8-2A0A0B4J237 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.83■□□□□ 0.61
TRAV8-2A0A0B4J237 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV8-2A0A0B4J237 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV8-2A0A0B4J237 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV8-2A0A0B4J237 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV8-2A0A0B4J237 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-2A0A0B4J237 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV8-2A0A0B4J237 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRAV8-2A0A0B4J237 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-2A0A0B4J237 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV8-2A0A0B4J237 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-2A0A0B4J237 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-2A0A0B4J237 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-2A0A0B4J237 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV8-2A0A0B4J237 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.81■□□□□ 0.6
TRAV8-2A0A0B4J237 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV8-2A0A0B4J237 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAV8-2A0A0B4J237 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV8-2A0A0B4J237 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV8-2A0A0B4J237 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV8-2A0A0B4J237 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRAV8-2A0A0B4J237 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV8-2A0A0B4J237 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAV8-2A0A0B4J237 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV8-2A0A0B4J237 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV8-2A0A0B4J237 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV8-2A0A0B4J237 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-2A0A0B4J237 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV8-2A0A0B4J237 AL449106.1-201ENST00000608517 1980 ntBASIC18.78■□□□□ 0.6
TRAV8-2A0A0B4J237 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-2A0A0B4J237 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-2A0A0B4J237 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-2A0A0B4J237 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-2A0A0B4J237 RPS2P35-201ENST00000443417 897 ntBASIC18.77■□□□□ 0.6
TRAV8-2A0A0B4J237 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-2A0A0B4J237 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV8-2A0A0B4J237 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV8-2A0A0B4J237 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV8-2A0A0B4J237 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV8-2A0A0B4J237 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV8-2A0A0B4J237 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV8-2A0A0B4J237 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV8-2A0A0B4J237 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV8-2A0A0B4J237 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV8-2A0A0B4J237 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TRAV8-2A0A0B4J237 AC091060.1-201ENST00000623524 1766 ntBASIC18.75■□□□□ 0.59
TRAV8-2A0A0B4J237 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV8-2A0A0B4J237 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV8-2A0A0B4J237 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV8-2A0A0B4J237 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV8-2A0A0B4J237 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-2A0A0B4J237 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-2A0A0B4J237 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAV8-2A0A0B4J237 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-2A0A0B4J237 AP004609.3-201ENST00000610705 1884 ntBASIC18.73■□□□□ 0.59
TRAV8-2A0A0B4J237 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-2A0A0B4J237 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAV8-2A0A0B4J237 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV8-2A0A0B4J237 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV8-2A0A0B4J237 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV8-2A0A0B4J237 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV8-2A0A0B4J237 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV8-2A0A0B4J237 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV8-2A0A0B4J237 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRAV8-2A0A0B4J237 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-2A0A0B4J237 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-2A0A0B4J237 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAV8-2A0A0B4J237 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-2A0A0B4J237 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV8-2A0A0B4J237 WHAMMP3-201ENST00000611636 1609 ntBASIC18.69■□□□□ 0.58
TRAV8-2A0A0B4J237 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRAV8-2A0A0B4J237 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV8-2A0A0B4J237 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV8-2A0A0B4J237 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV8-2A0A0B4J237 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAV8-2A0A0B4J237 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAV8-2A0A0B4J237 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV8-2A0A0B4J237 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV8-2A0A0B4J237 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-2A0A0B4J237 LINC01971-201ENST00000617888 1048 ntBASIC18.67■□□□□ 0.58
TRAV8-2A0A0B4J237 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms