Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SORT1-203ENST00000471996 469 ntTSL 323.88■■□□□ 1.411e-14■■■□□ 17.6
XRN2Q9H0D6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.351e-14■■■□□ 17.6
XRN2Q9H0D6 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.576e-7■■■□□ 17.6
XRN2Q9H0D6 RPL13A-206ENST00000476268 1623 ntTSL 319.18■□□□□ 0.663e-14■■■□□ 17.6
XRN2Q9H0D6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.18■■■□□ 2.18e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.98■■□□□ 1.918e-8■■■□□ 17.6
XRN2Q9H0D6 SMG1P3-201ENST00000435197 416 ntTSL 322.46■■□□□ 1.191e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.898e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.548e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.84■□□□□ 0.458e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.13■□□□□ 0.338e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.02■□□□□ 0.328e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.9■□□□□ 0.38e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-204ENST00000460404 942 ntTSL 1 (best)16.85■□□□□ 0.298e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.01■□□□□ 0.158e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-207ENST00000468323 894 ntTSL 214.22□□□□□ -0.138e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-216ENST00000498169 662 ntTSL 214.08□□□□□ -0.168e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-208ENST00000475518 637 ntTSL 2 BASIC11.87□□□□□ -0.518e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-213ENST00000494827 793 ntTSL 4 BASIC8.31□□□□□ -1.088e-8■■■□□ 17.6
XRN2Q9H0D6 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.4□□□□□ -1.228e-8■■■□□ 17.6
XRN2Q9H0D6 EXOC3L4-203ENST00000559661 665 ntTSL 521.34■■□□□ 1.018e-7■■■□□ 17.6
XRN2Q9H0D6 RPL10-212ENST00000479366 569 ntTSL 416■□□□□ 0.154e-9■■■□□ 17.6
XRN2Q9H0D6 DLEU1-214ENST00000470726 508 ntTSL 59.76□□□□□ -0.854e-6■■■□□ 17.6
XRN2Q9H0D6 DLEU1-221ENST00000479420 612 ntTSL 57.14□□□□□ -1.274e-6■■■□□ 17.6
XRN2Q9H0D6 TLK1-204ENST00000413010 603 ntTSL 520.61■□□□□ 0.894e-7■■■□□ 17.6
XRN2Q9H0D6 TLK1-203ENST00000409443 2783 ntTSL 215.78■□□□□ 0.124e-7■■■□□ 17.6
XRN2Q9H0D6 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.94□□□□□ -0.184e-7■■■□□ 17.6
XRN2Q9H0D6 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.274e-7■■■□□ 17.6
XRN2Q9H0D6 TLK1-201ENST00000359766 4321 ntTSL 511.61□□□□□ -0.554e-7■■■□□ 17.6
XRN2Q9H0D6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.26□□□□□ -1.574e-7■■■□□ 17.6
XRN2Q9H0D6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.54■■■□□ 2.162e-6■■■□□ 17.6
XRN2Q9H0D6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.54■■■□□ 2.162e-6■■■□□ 17.6
XRN2Q9H0D6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.54■■■□□ 2.162e-6■■■□□ 17.6
XRN2Q9H0D6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.722e-6■■■□□ 17.6
XRN2Q9H0D6 MPC1-205ENST00000487218 918 ntTSL 56.14□□□□□ -1.432e-6■■■□□ 17.6
XRN2Q9H0D6 MPC1-204ENST00000475708 651 ntTSL 53.27□□□□□ -1.892e-6■■■□□ 17.6
XRN2Q9H0D6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.31■■■□□ 2.281e-7■■■□□ 17.6
XRN2Q9H0D6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.34■■□□□ 1.011e-7■■■□□ 17.6
XRN2Q9H0D6 LINC01770-204ENST00000454562 424 ntTSL 319.38■□□□□ 0.691e-7■■■□□ 17.6
XRN2Q9H0D6 MGAT4A-205ENST00000460768 426 ntTSL 221.18■□□□□ 0.982e-8■■■□□ 17.6
XRN2Q9H0D6 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.152e-8■■■□□ 17.6
XRN2Q9H0D6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.05■□□□□ 0.87e-6■■■□□ 17.5
XRN2Q9H0D6 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.523e-6■■■□□ 17.5
XRN2Q9H0D6 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.523e-6■■■□□ 17.5
XRN2Q9H0D6 PTBP1-211ENST00000587094 273 ntTSL 313.86□□□□□ -0.199e-7■■■□□ 17.5
XRN2Q9H0D6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.01■□□□□ 0.472e-8■■■□□ 17.5
XRN2Q9H0D6 SRRT-206ENST00000460194 575 ntTSL 216.3■□□□□ 0.21e-20■■■□□ 17.5
XRN2Q9H0D6 SLC3A2-219ENST00000542793 539 ntTSL 29.01□□□□□ -0.971e-20■■■□□ 17.5
XRN2Q9H0D6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25■■□□□ 1.594e-7■■■□□ 17.5
XRN2Q9H0D6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.284e-7■■■□□ 17.5
XRN2Q9H0D6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.39■■□□□ 1.014e-7■■■□□ 17.5
XRN2Q9H0D6 UCKL1-207ENST00000632800 1530 ntTSL 516.12■□□□□ 0.171e-6■■■□□ 17.5
XRN2Q9H0D6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.072e-6■■■□□ 17.5
XRN2Q9H0D6 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.232e-6■■■□□ 17.5
XRN2Q9H0D6 ASAP1-215ENST00000524299 550 ntTSL 412.28□□□□□ -0.442e-6■■■□□ 17.5
XRN2Q9H0D6 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC12.07□□□□□ -0.484e-6■■■□□ 17.5
XRN2Q9H0D6 PCMTD1-205ENST00000521046 856 ntTSL 220.84■□□□□ 0.932e-7■■■□□ 17.5
XRN2Q9H0D6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.48■□□□□ 0.712e-7■■■□□ 17.5
XRN2Q9H0D6 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.252e-7■■■□□ 17.5
XRN2Q9H0D6 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.162e-7■■■□□ 17.5
XRN2Q9H0D6 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.83□□□□□ -0.362e-7■■■□□ 17.5
XRN2Q9H0D6 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.722e-6■■■□□ 17.5
XRN2Q9H0D6 PCMTD1-203ENST00000519559 1204 ntTSL 28.57□□□□□ -1.042e-7■■■□□ 17.5
XRN2Q9H0D6 EHBP1-220ENST00000496857 1262 ntTSL 1 (best)12.82□□□□□ -0.362e-7■■■□□ 17.5
XRN2Q9H0D6 HGS-208ENST00000572392 824 ntTSL 518.28■□□□□ 0.521e-6■■■□□ 17.5
XRN2Q9H0D6 SLC2A1-206ENST00000625233 1031 ntTSL 221.28■■□□□ 12e-7■■■□□ 17.5
XRN2Q9H0D6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.28■■□□□ 12e-7■■■□□ 17.5
XRN2Q9H0D6 SLC2A1-202ENST00000415851 578 ntTSL 221.06■□□□□ 0.962e-7■■■□□ 17.5
XRN2Q9H0D6 SLC2A1-201ENST00000372500 533 ntTSL 319.05■□□□□ 0.642e-7■■■□□ 17.5
XRN2Q9H0D6 SLC2A1-209ENST00000630821 591 ntTSL 217.45■□□□□ 0.382e-7■■■□□ 17.5
XRN2Q9H0D6 SLC2A1-208ENST00000630287 2398 ntTSL 515.28■□□□□ 0.042e-7■■■□□ 17.5
XRN2Q9H0D6 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.552e-7■■■□□ 17.5
XRN2Q9H0D6 SH3GLB2-208ENST00000455407 837 ntTSL 234.3■■■■□ 3.081e-8■■■□□ 17.5
XRN2Q9H0D6 SH3GLB2-212ENST00000483980 1015 ntTSL 233.78■■■■□ 31e-8■■■□□ 17.5
XRN2Q9H0D6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.1■■■□□ 2.251e-8■■■□□ 17.5
XRN2Q9H0D6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.451e-8■■■□□ 17.5
XRN2Q9H0D6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.951e-8■■■□□ 17.5
XRN2Q9H0D6 SH3GLB2-210ENST00000477165 623 ntTSL 218.05■□□□□ 0.481e-8■■■□□ 17.5
XRN2Q9H0D6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.1■□□□□ 0.331e-8■■■□□ 17.5
XRN2Q9H0D6 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC14.81□□□□□ -0.041e-8■■■□□ 17.5
XRN2Q9H0D6 SH3GLB2-209ENST00000461811 4828 ntTSL 1 (best)13.23□□□□□ -0.291e-8■■■□□ 17.5
XRN2Q9H0D6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.07■□□□□ 0.968e-12■■■□□ 17.5
XRN2Q9H0D6 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.18e-12■■■□□ 17.5
XRN2Q9H0D6 KMT5A-209ENST00000537270 352 ntTSL 521.07■□□□□ 0.964e-7■■■□□ 17.5
XRN2Q9H0D6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.88■□□□□ 0.454e-8■■■□□ 17.5
XRN2Q9H0D6 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.384e-8■■■□□ 17.5
XRN2Q9H0D6 ABCC3-203ENST00000502426 5326 ntTSL 212.48□□□□□ -0.414e-8■■■□□ 17.5
XRN2Q9H0D6 ABCC3-207ENST00000505699 5271 ntTSL 212.25□□□□□ -0.454e-8■■■□□ 17.5
XRN2Q9H0D6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.26■■□□□ 1.632e-6■■■□□ 17.4
XRN2Q9H0D6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.59■□□□□ 0.892e-6■■■□□ 17.4
XRN2Q9H0D6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.2■■□□□ 1.469e-8■■■□□ 17.4
XRN2Q9H0D6 TXNRD2-217ENST00000496729 910 ntTSL 423.78■■□□□ 1.49e-8■■■□□ 17.4
XRN2Q9H0D6 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.925e-7■■■□□ 17.4
XRN2Q9H0D6 SRSF2-206ENST00000582449 1518 ntTSL 223.13■■□□□ 1.291e-17■■■□□ 17.4
XRN2Q9H0D6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.82■□□□□ 0.925e-6■■■□□ 17.4
XRN2Q9H0D6 SPPL2B-202ENST00000586111 390 ntTSL 320.77■□□□□ 0.925e-6■■■□□ 17.4
XRN2Q9H0D6 INO80E-205ENST00000562441 1412 ntTSL 220.68■□□□□ 0.95e-6■■■□□ 17.4
XRN2Q9H0D6 INO80E-211ENST00000567987 1926 ntTSL 1 (best)20.37■□□□□ 0.855e-6■■■□□ 17.4
XRN2Q9H0D6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.715e-6■■■□□ 17.4
XRN2Q9H0D6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.31■□□□□ 0.685e-6■■■□□ 17.4
Retrieved 100 of 21,068 protein–RNA pairs in 158.5 ms