RNA–Protein interactions for RNA: ENST00000519559.1

PCMTD1-203, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 2

Gene PCMTD1, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-203ENST00000519559 AEBP2Q6ZN18 517 aaPredicted RBP25.62■■□□□ 1.69
PCMTD1-203ENST00000519559 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
PCMTD1-203ENST00000519559 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
PCMTD1-203ENST00000519559 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
PCMTD1-203ENST00000519559 FOXD1Q16676 465 aa20.21■□□□□ 0.83
PCMTD1-203ENST00000519559 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
PCMTD1-203ENST00000519559 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
PCMTD1-203ENST00000519559 ADRA2BP18089 450 aa19.14■□□□□ 0.65
PCMTD1-203ENST00000519559 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
PCMTD1-203ENST00000519559 MSH5O43196 834 aa18.7■□□□□ 0.58
PCMTD1-203ENST00000519559 POTEDQ86YR6 584 aa17.71■□□□□ 0.43
PCMTD1-203ENST00000519559 MAPK8IP2Q13387 824 aaPredicted RBP17.46■□□□□ 0.39
PCMTD1-203ENST00000519559 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
PCMTD1-203ENST00000519559 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
PCMTD1-203ENST00000519559 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
PCMTD1-203ENST00000519559 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
PCMTD1-203ENST00000519559 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
PCMTD1-203ENST00000519559 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
PCMTD1-203ENST00000519559 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
PCMTD1-203ENST00000519559 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
PCMTD1-203ENST00000519559 KCNA4P22459 653 aa16.75■□□□□ 0.27
PCMTD1-203ENST00000519559 NPM3O75607 178 aaKnown RBP16.71■□□□□ 0.27
PCMTD1-203ENST00000519559 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
PCMTD1-203ENST00000519559 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
PCMTD1-203ENST00000519559 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
PCMTD1-203ENST00000519559 ABCC9O60706 1549 aa15.95■□□□□ 0.14
PCMTD1-203ENST00000519559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.91■□□□□ 0.14
PCMTD1-203ENST00000519559 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
PCMTD1-203ENST00000519559 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
PCMTD1-203ENST00000519559 C1QBPQ07021 282 aaKnown RBP15.81■□□□□ 0.12
PCMTD1-203ENST00000519559 U3KPZ7 1027 aaPredicted RBP15.76■□□□□ 0.11
PCMTD1-203ENST00000519559 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
PCMTD1-203ENST00000519559 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
PCMTD1-203ENST00000519559 ZBTB22O15209 634 aa15.48■□□□□ 0.07
PCMTD1-203ENST00000519559 MYCNP04198 464 aaPredicted RBP15.41■□□□□ 0.06
PCMTD1-203ENST00000519559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
PCMTD1-203ENST00000519559 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
PCMTD1-203ENST00000519559 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
PCMTD1-203ENST00000519559 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
PCMTD1-203ENST00000519559 CCDC180Q9P1Z9 1646 aa15.29■□□□□ 0.04
PCMTD1-203ENST00000519559 APLP2Q06481 763 aa15.23■□□□□ 0.03
PCMTD1-203ENST00000519559 CAPN15O75808 1086 aa15.21■□□□□ 0.03
PCMTD1-203ENST00000519559 DSG3P32926 999 aa15.16■□□□□ 0.02
PCMTD1-203ENST00000519559 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
PCMTD1-203ENST00000519559 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
PCMTD1-203ENST00000519559 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
PCMTD1-203ENST00000519559 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
PCMTD1-203ENST00000519559 ATXN8OSP0DMR3 200 aa15.01□□□□□ -0.01
PCMTD1-203ENST00000519559 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
PCMTD1-203ENST00000519559 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
PCMTD1-203ENST00000519559 ABCB7O75027 752 aa14.92□□□□□ -0.02
PCMTD1-203ENST00000519559 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
PCMTD1-203ENST00000519559 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
PCMTD1-203ENST00000519559 POLA2Q14181 598 aa14.81□□□□□ -0.04
PCMTD1-203ENST00000519559 DNAJC5Q9H3Z4 198 aa14.7□□□□□ -0.06
PCMTD1-203ENST00000519559 NACADO15069 1562 aa14.68□□□□□ -0.06
PCMTD1-203ENST00000519559 ZBTB12Q9Y330 459 aaPredicted RBP14.56□□□□□ -0.08
PCMTD1-203ENST00000519559 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
PCMTD1-203ENST00000519559 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
PCMTD1-203ENST00000519559 UNC13AQ9UPW8 1703 aa14.41□□□□□ -0.1
PCMTD1-203ENST00000519559 RBM42Q9BTD8 480 aaKnown RBP14.38□□□□□ -0.11
PCMTD1-203ENST00000519559 BICRAQ9NZM4 1560 aa14.36□□□□□ -0.11
PCMTD1-203ENST00000519559 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
PCMTD1-203ENST00000519559 FBLN2P98095 1184 aa14.33□□□□□ -0.12
PCMTD1-203ENST00000519559 CC2D2AQ9P2K1 1620 aa14.31□□□□□ -0.12
PCMTD1-203ENST00000519559 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
PCMTD1-203ENST00000519559 SHROOM4Q9ULL8 1493 aa14.21□□□□□ -0.13
PCMTD1-203ENST00000519559 SPDYE2BA6NHP3 402 aa14.18□□□□□ -0.14
PCMTD1-203ENST00000519559 SPDYE6P0CI01 402 aa14.18□□□□□ -0.14
PCMTD1-203ENST00000519559 SPDYE2Q495Y8 402 aa14.18□□□□□ -0.14
PCMTD1-203ENST00000519559 AKT1S1Q96B36 256 aa14.18□□□□□ -0.14
PCMTD1-203ENST00000519559 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
PCMTD1-203ENST00000519559 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
PCMTD1-203ENST00000519559 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
PCMTD1-203ENST00000519559 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
PCMTD1-203ENST00000519559 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
PCMTD1-203ENST00000519559 CUX2O14529 1486 aa13.96□□□□□ -0.17
PCMTD1-203ENST00000519559 POTEHQ6S545 545 aa13.92□□□□□ -0.18
PCMTD1-203ENST00000519559 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
PCMTD1-203ENST00000519559 TRIM41Q8WV44 630 aa13.91□□□□□ -0.18
PCMTD1-203ENST00000519559 ERCC6Q03468 1493 aa13.91□□□□□ -0.18
PCMTD1-203ENST00000519559 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
PCMTD1-203ENST00000519559 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
PCMTD1-203ENST00000519559 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
PCMTD1-203ENST00000519559 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
PCMTD1-203ENST00000519559 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
PCMTD1-203ENST00000519559 PROM2Q8N271 834 aa13.77□□□□□ -0.21
PCMTD1-203ENST00000519559 FXR2P51116 673 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCMTD1-203ENST00000519559 PIP4P2Q8N4L2 257 aa13.7□□□□□ -0.22
PCMTD1-203ENST00000519559 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
PCMTD1-203ENST00000519559 NCAPD3P42695 1498 aa13.57□□□□□ -0.24
PCMTD1-203ENST00000519559 FKBP8Q14318 412 aa13.57□□□□□ -0.24
PCMTD1-203ENST00000519559 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
PCMTD1-203ENST00000519559 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
PCMTD1-203ENST00000519559 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
PCMTD1-203ENST00000519559 NESP48681 1621 aa13.48□□□□□ -0.25
PCMTD1-203ENST00000519559 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
PCMTD1-203ENST00000519559 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
PCMTD1-203ENST00000519559 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
PCMTD1-203ENST00000519559 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms