RNA–Protein interactions for RNA: ENST00000542793.1

SLC3A2-219, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-219ENST00000542793 AEBP2Q6ZN18 517 aaPredicted RBP20.23■□□□□ 0.83
SLC3A2-219ENST00000542793 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
SLC3A2-219ENST00000542793 NISCHQ9Y2I1 1504 aa18.69■□□□□ 0.58
SLC3A2-219ENST00000542793 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
SLC3A2-219ENST00000542793 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
SLC3A2-219ENST00000542793 ABCC9O60706 1549 aa16.65■□□□□ 0.26
SLC3A2-219ENST00000542793 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
SLC3A2-219ENST00000542793 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
SLC3A2-219ENST00000542793 FOXD1Q16676 465 aa15.95■□□□□ 0.14
SLC3A2-219ENST00000542793 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
SLC3A2-219ENST00000542793 RB1CC1Q8TDY2 1594 aa15.82■□□□□ 0.12
SLC3A2-219ENST00000542793 ZCCHC6Q5VYS8 1495 aaKnown RBP15.69■□□□□ 0.1
SLC3A2-219ENST00000542793 NACADO15069 1562 aa15.66■□□□□ 0.1
SLC3A2-219ENST00000542793 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
SLC3A2-219ENST00000542793 UNC13AQ9UPW8 1703 aa15.62■□□□□ 0.09
SLC3A2-219ENST00000542793 DCAF1Q9Y4B6 1507 aa15.51■□□□□ 0.07
SLC3A2-219ENST00000542793 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
SLC3A2-219ENST00000542793 BICRAQ9NZM4 1560 aa15.44■□□□□ 0.06
SLC3A2-219ENST00000542793 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
SLC3A2-219ENST00000542793 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
SLC3A2-219ENST00000542793 ADRA2BP18089 450 aa15.28■□□□□ 0.04
SLC3A2-219ENST00000542793 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
SLC3A2-219ENST00000542793 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0
SLC3A2-219ENST00000542793 CC2D2AQ9P2K1 1620 aa15.05■□□□□ -0
SLC3A2-219ENST00000542793 PIAS4Q8N2W9 510 aaPredicted RBP15.04■□□□□ -0
SLC3A2-219ENST00000542793 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
SLC3A2-219ENST00000542793 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
SLC3A2-219ENST00000542793 MSH5O43196 834 aa14.8□□□□□ -0.04
SLC3A2-219ENST00000542793 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
SLC3A2-219ENST00000542793 DNAJC5Q9H3Z4 198 aa14.47□□□□□ -0.09
SLC3A2-219ENST00000542793 SUPT5HO00267 1087 aaKnown RBP14.46□□□□□ -0.09
SLC3A2-219ENST00000542793 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
SLC3A2-219ENST00000542793 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
SLC3A2-219ENST00000542793 NCAPD3P42695 1498 aa14.41□□□□□ -0.1
SLC3A2-219ENST00000542793 ERCC6Q03468 1493 aa14.41□□□□□ -0.1
SLC3A2-219ENST00000542793 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
SLC3A2-219ENST00000542793 ATAD2BQ9ULI0 1458 aa14.39□□□□□ -0.11
SLC3A2-219ENST00000542793 SMARCA2P51531 1590 aa14.38□□□□□ -0.11
SLC3A2-219ENST00000542793 HMGXB3Q12766 1538 aa14.35□□□□□ -0.11
SLC3A2-219ENST00000542793 CUX2O14529 1486 aa14.34□□□□□ -0.11
SLC3A2-219ENST00000542793 NESP48681 1621 aa14.32□□□□□ -0.12
SLC3A2-219ENST00000542793 BAZ1BQ9UIG0 1483 aaKnown RBP14.3□□□□□ -0.12
SLC3A2-219ENST00000542793 WIZO95785 1651 aa14.24□□□□□ -0.13
SLC3A2-219ENST00000542793 PEG3Q9GZU2 1588 aa14.24□□□□□ -0.13
SLC3A2-219ENST00000542793 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
SLC3A2-219ENST00000542793 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
SLC3A2-219ENST00000542793 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
SLC3A2-219ENST00000542793 PPP4R3CPQ6ZMV5 832 aa14.15□□□□□ -0.14
SLC3A2-219ENST00000542793 TOP2AP11388 1531 aaKnown RBP14.13□□□□□ -0.15
SLC3A2-219ENST00000542793 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
SLC3A2-219ENST00000542793 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
SLC3A2-219ENST00000542793 CCDC88BA6NC98 1476 aa14.01□□□□□ -0.17
SLC3A2-219ENST00000542793 CADPSQ9ULU8 1353 aa13.98□□□□□ -0.17
SLC3A2-219ENST00000542793 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
SLC3A2-219ENST00000542793 WDR62O43379 1518 aa13.92□□□□□ -0.18
SLC3A2-219ENST00000542793 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
SLC3A2-219ENST00000542793 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
SLC3A2-219ENST00000542793 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
SLC3A2-219ENST00000542793 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
SLC3A2-219ENST00000542793 CFTRP13569 1480 aa13.81□□□□□ -0.2
SLC3A2-219ENST00000542793 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
SLC3A2-219ENST00000542793 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
SLC3A2-219ENST00000542793 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
SLC3A2-219ENST00000542793 KCNA4P22459 653 aa13.77□□□□□ -0.21
SLC3A2-219ENST00000542793 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
SLC3A2-219ENST00000542793 URB2Q14146 1524 aaKnown RBP13.76□□□□□ -0.21
SLC3A2-219ENST00000542793 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
SLC3A2-219ENST00000542793 ZNF608Q9ULD9 1512 aaPredicted RBP13.62□□□□□ -0.23
SLC3A2-219ENST00000542793 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
SLC3A2-219ENST00000542793 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
SLC3A2-219ENST00000542793 TOPBP1Q92547 1522 aa13.6□□□□□ -0.23
SLC3A2-219ENST00000542793 WRNQ14191 1432 aaPredicted RBP eCLIP13.59□□□□□ -0.23
SLC3A2-219ENST00000542793 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.24
SLC3A2-219ENST00000542793 RIMBP3CA6NJZ7 1639 aa13.57□□□□□ -0.24
SLC3A2-219ENST00000542793 RIMBP3BA6NNM3 1639 aa13.57□□□□□ -0.24
SLC3A2-219ENST00000542793 RIMBP3Q9UFD9 1639 aa13.57□□□□□ -0.24
SLC3A2-219ENST00000542793 NPM3O75607 178 aaKnown RBP13.57□□□□□ -0.24
SLC3A2-219ENST00000542793 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
SLC3A2-219ENST00000542793 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
SLC3A2-219ENST00000542793 SYNJ1O43426 1573 aa13.53□□□□□ -0.24
SLC3A2-219ENST00000542793 CHD1O14646 1710 aa13.52□□□□□ -0.25
SLC3A2-219ENST00000542793 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
SLC3A2-219ENST00000542793 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
SLC3A2-219ENST00000542793 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
SLC3A2-219ENST00000542793 CUX1P39880 1505 aa13.49□□□□□ -0.25
SLC3A2-219ENST00000542793 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
SLC3A2-219ENST00000542793 AQRO60306 1485 aaKnown RBP eCLIP13.46□□□□□ -0.257e-12■■■□□ 15.2
SLC3A2-219ENST00000542793 POLA1P09884 1462 aaPredicted RBP13.46□□□□□ -0.25
SLC3A2-219ENST00000542793 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.26
SLC3A2-219ENST00000542793 FBLN2P98095 1184 aa13.43□□□□□ -0.26
SLC3A2-219ENST00000542793 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
SLC3A2-219ENST00000542793 SOGA1O94964 1423 aa13.41□□□□□ -0.26
SLC3A2-219ENST00000542793 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
SLC3A2-219ENST00000542793 FGD5Q6ZNL6 1462 aa13.38□□□□□ -0.27
SLC3A2-219ENST00000542793 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
SLC3A2-219ENST00000542793 CYB5RLQ6IPT4 315 aa13.37□□□□□ -0.27
SLC3A2-219ENST00000542793 EEA1Q15075 1411 aa13.37□□□□□ -0.27
SLC3A2-219ENST00000542793 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
SLC3A2-219ENST00000542793 RUSC2Q8N2Y8 1516 aa13.36□□□□□ -0.27
SLC3A2-219ENST00000542793 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms