Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PACS1Q6VY07 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.66■□□□□ 0.58
PACS1Q6VY07 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.65■□□□□ 0.58
PACS1Q6VY07 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PACS1Q6VY07 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.65■□□□□ 0.58
PACS1Q6VY07 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.65■□□□□ 0.58
PACS1Q6VY07 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PACS1Q6VY07 AC067852.2-201ENST00000590513 2313 ntBASIC18.65■□□□□ 0.58
PACS1Q6VY07 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 AL390955.1-201ENST00000428694 934 ntBASIC18.65■□□□□ 0.58
PACS1Q6VY07 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.65■□□□□ 0.58
PACS1Q6VY07 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.65■□□□□ 0.58
PACS1Q6VY07 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.65■□□□□ 0.58
PACS1Q6VY07 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.65■□□□□ 0.58
PACS1Q6VY07 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PACS1Q6VY07 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PACS1Q6VY07 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PACS1Q6VY07 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PACS1Q6VY07 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS1Q6VY07 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PACS1Q6VY07 AC008764.6-201ENST00000595909 2069 ntBASIC18.64■□□□□ 0.57
PACS1Q6VY07 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PACS1Q6VY07 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS1Q6VY07 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PACS1Q6VY07 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.64■□□□□ 0.57
PACS1Q6VY07 AL023803.3-201ENST00000615559 522 ntBASIC18.64■□□□□ 0.57
PACS1Q6VY07 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.64■□□□□ 0.57
PACS1Q6VY07 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PACS1Q6VY07 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.64■□□□□ 0.57
PACS1Q6VY07 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PACS1Q6VY07 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PACS1Q6VY07 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS1Q6VY07 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.64■□□□□ 0.57
PACS1Q6VY07 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PACS1Q6VY07 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.64■□□□□ 0.57
PACS1Q6VY07 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PACS1Q6VY07 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.63■□□□□ 0.57
PACS1Q6VY07 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.63■□□□□ 0.57
PACS1Q6VY07 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PACS1Q6VY07 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PACS1Q6VY07 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.63■□□□□ 0.57
PACS1Q6VY07 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.63■□□□□ 0.57
PACS1Q6VY07 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.63■□□□□ 0.57
PACS1Q6VY07 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.63■□□□□ 0.57
PACS1Q6VY07 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.63■□□□□ 0.57
PACS1Q6VY07 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PACS1Q6VY07 AC093677.2-201ENST00000600169 1863 ntBASIC18.63■□□□□ 0.57
PACS1Q6VY07 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 AC008556.1-201ENST00000610908 2040 ntBASIC18.62■□□□□ 0.57
PACS1Q6VY07 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 C2orf69P3-201ENST00000565542 1120 ntBASIC18.62■□□□□ 0.57
PACS1Q6VY07 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 AC008622.2-201ENST00000617006 1229 ntBASIC18.62■□□□□ 0.57
PACS1Q6VY07 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PACS1Q6VY07 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PACS1Q6VY07 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms