Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ODF4Q2M2E3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ODF4Q2M2E3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
ODF4Q2M2E3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.35■□□□□ 0.21
ODF4Q2M2E3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.35■□□□□ 0.21
ODF4Q2M2E3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
ODF4Q2M2E3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ODF4Q2M2E3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ODF4Q2M2E3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ODF4Q2M2E3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ODF4Q2M2E3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 AC099343.3-201ENST00000605834 2503 ntBASIC16.34■□□□□ 0.21
ODF4Q2M2E3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 ID1-201ENST00000376105 1233 ntBASIC16.34■□□□□ 0.21
ODF4Q2M2E3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 AC004980.1-204ENST00000429707 299 ntBASIC16.34■□□□□ 0.21
ODF4Q2M2E3 RPS2P4-201ENST00000476944 856 ntBASIC16.34■□□□□ 0.21
ODF4Q2M2E3 AP002982.1-201ENST00000492365 877 ntBASIC16.34■□□□□ 0.21
ODF4Q2M2E3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 AC110285.5-201ENST00000611501 352 ntBASIC16.34■□□□□ 0.21
ODF4Q2M2E3 AL445675.2-201ENST00000620291 557 ntBASIC16.34■□□□□ 0.21
ODF4Q2M2E3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 KRT8P32-201ENST00000512863 1461 ntBASIC16.34■□□□□ 0.21
ODF4Q2M2E3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ODF4Q2M2E3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
ODF4Q2M2E3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ODF4Q2M2E3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.33■□□□□ 0.21
ODF4Q2M2E3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.33■□□□□ 0.21
ODF4Q2M2E3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ODF4Q2M2E3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 CROCCP1-201ENST00000426910 5675 ntBASIC16.33■□□□□ 0.2
ODF4Q2M2E3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 KRT18P6-201ENST00000555540 1265 ntBASIC16.33■□□□□ 0.2
ODF4Q2M2E3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 HTR7P1-201ENST00000538670 1336 ntBASIC16.33■□□□□ 0.2
ODF4Q2M2E3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ODF4Q2M2E3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ODF4Q2M2E3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ODF4Q2M2E3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms