Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKAP51800 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 BX323043.1-201ENST00000641006 1765 ntBASIC18.07■□□□□ 0.48
CLCNKAP51800 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.07■□□□□ 0.48
CLCNKAP51800 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLCNKAP51800 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.07■□□□□ 0.48
CLCNKAP51800 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.07■□□□□ 0.48
CLCNKAP51800 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.07■□□□□ 0.48
CLCNKAP51800 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCNKAP51800 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLCNKAP51800 CROCCP3-202ENST00000420820 1947 ntBASIC18.07■□□□□ 0.48
CLCNKAP51800 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 AL163051.1-201ENST00000569214 1512 ntBASIC18.07■□□□□ 0.48
CLCNKAP51800 AC020763.4-201ENST00000623414 4170 ntBASIC18.07■□□□□ 0.48
CLCNKAP51800 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCNKAP51800 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCNKAP51800 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCNKAP51800 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCNKAP51800 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CLCNKAP51800 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.06■□□□□ 0.48
CLCNKAP51800 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLCNKAP51800 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLCNKAP51800 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCNKAP51800 AL645929.1-201ENST00000420084 975 ntBASIC18.06■□□□□ 0.48
CLCNKAP51800 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.06■□□□□ 0.48
CLCNKAP51800 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCNKAP51800 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLCNKAP51800 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.06■□□□□ 0.48
CLCNKAP51800 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCNKAP51800 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.06■□□□□ 0.48
CLCNKAP51800 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCNKAP51800 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.06■□□□□ 0.48
CLCNKAP51800 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCNKAP51800 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 AC099343.3-201ENST00000605834 2503 ntBASIC18.05■□□□□ 0.48
CLCNKAP51800 AL031598.1-201ENST00000561511 1773 ntBASIC18.05■□□□□ 0.48
CLCNKAP51800 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLCNKAP51800 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLCNKAP51800 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.05■□□□□ 0.48
CLCNKAP51800 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLCNKAP51800 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLCNKAP51800 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCNKAP51800 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCNKAP51800 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCNKAP51800 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCNKAP51800 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 MYLKP1-201ENST00000509077 1580 ntBASIC18.04■□□□□ 0.48
CLCNKAP51800 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
CLCNKAP51800 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCNKAP51800 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCNKAP51800 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CLCNKAP51800 AC138932.1-201ENST00000534164 6830 ntBASIC18.04■□□□□ 0.48
CLCNKAP51800 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCNKAP51800 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCNKAP51800 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCNKAP51800 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.04■□□□□ 0.48
CLCNKAP51800 UPK3BP1-201ENST00000428678 509 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms