Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
PCP4P48539 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.7□□□□□ -0.38
PCP4P48539 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
PCP4P48539 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
PCP4P48539 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
PCP4P48539 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
PCP4P48539 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.7□□□□□ -0.38
PCP4P48539 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.7□□□□□ -0.38
PCP4P48539 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
PCP4P48539 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 AC067930.6-201ENST00000623257 4947 ntBASIC12.7□□□□□ -0.38
PCP4P48539 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCP4P48539 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
PCP4P48539 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.7□□□□□ -0.38
PCP4P48539 AC004817.3-201ENST00000602957 2129 ntBASIC12.7□□□□□ -0.38
PCP4P48539 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.7□□□□□ -0.38
PCP4P48539 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.7□□□□□ -0.38
PCP4P48539 AC023908.3-201ENST00000564211 3047 ntBASIC12.7□□□□□ -0.38
PCP4P48539 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
PCP4P48539 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
PCP4P48539 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.69□□□□□ -0.38
PCP4P48539 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
PCP4P48539 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 AC018755.3-202ENST00000596210 929 ntBASIC12.69□□□□□ -0.38
PCP4P48539 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
PCP4P48539 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
PCP4P48539 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.69□□□□□ -0.38
PCP4P48539 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.69□□□□□ -0.38
PCP4P48539 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 AC006333.2-201ENST00000607957 2099 ntBASIC12.69□□□□□ -0.38
PCP4P48539 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.69□□□□□ -0.38
PCP4P48539 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.69□□□□□ -0.38
PCP4P48539 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
PCP4P48539 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
PCP4P48539 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.69□□□□□ -0.38
PCP4P48539 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.69□□□□□ -0.38
PCP4P48539 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCP4P48539 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.68□□□□□ -0.38
PCP4P48539 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.68□□□□□ -0.38
PCP4P48539 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.68□□□□□ -0.38
PCP4P48539 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PCP4P48539 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.68□□□□□ -0.38
PCP4P48539 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.68□□□□□ -0.38
PCP4P48539 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
PCP4P48539 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.68□□□□□ -0.38
PCP4P48539 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCP4P48539 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms