Protein–RNA interactions for Protein: P36222

CHI3L1, Chitinase-3-like protein 1, humanhuman

Predicted RBP Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1P36222 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.5■□□□□ 0.39
CHI3L1P36222 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHI3L1P36222 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHI3L1P36222 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHI3L1P36222 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.49■□□□□ 0.39
CHI3L1P36222 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.49■□□□□ 0.39
CHI3L1P36222 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CHI3L1P36222 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.49■□□□□ 0.39
CHI3L1P36222 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHI3L1P36222 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.49■□□□□ 0.39
CHI3L1P36222 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.49■□□□□ 0.39
CHI3L1P36222 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.49■□□□□ 0.39
CHI3L1P36222 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.49■□□□□ 0.39
CHI3L1P36222 SLC25A1P4-201ENST00000567977 778 ntBASIC17.49■□□□□ 0.39
CHI3L1P36222 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHI3L1P36222 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.49■□□□□ 0.39
CHI3L1P36222 AL133373.2-201ENST00000623187 2828 ntBASIC17.49■□□□□ 0.39
CHI3L1P36222 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CHI3L1P36222 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHI3L1P36222 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.49■□□□□ 0.39
CHI3L1P36222 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHI3L1P36222 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.49■□□□□ 0.39
CHI3L1P36222 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CHI3L1P36222 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.49■□□□□ 0.39
CHI3L1P36222 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHI3L1P36222 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 AC008556.1-201ENST00000610908 2040 ntBASIC17.48■□□□□ 0.39
CHI3L1P36222 AL109659.2-201ENST00000606809 1674 ntBASIC17.48■□□□□ 0.39
CHI3L1P36222 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.48■□□□□ 0.39
CHI3L1P36222 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.48■□□□□ 0.39
CHI3L1P36222 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.48■□□□□ 0.39
CHI3L1P36222 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.48■□□□□ 0.39
CHI3L1P36222 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.48■□□□□ 0.39
CHI3L1P36222 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.48■□□□□ 0.39
CHI3L1P36222 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.48■□□□□ 0.39
CHI3L1P36222 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.48■□□□□ 0.39
CHI3L1P36222 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.48■□□□□ 0.39
CHI3L1P36222 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHI3L1P36222 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.48■□□□□ 0.39
CHI3L1P36222 AC142381.4-202ENST00000563973 229 ntBASIC17.48■□□□□ 0.39
CHI3L1P36222 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.48■□□□□ 0.39
CHI3L1P36222 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHI3L1P36222 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.48■□□□□ 0.39
CHI3L1P36222 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.48■□□□□ 0.39
CHI3L1P36222 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHI3L1P36222 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 MYLKP1-201ENST00000509077 1580 ntBASIC17.48■□□□□ 0.39
CHI3L1P36222 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHI3L1P36222 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHI3L1P36222 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.48■□□□□ 0.39
CHI3L1P36222 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CHI3L1P36222 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHI3L1P36222 AC005332.8-201ENST00000622750 2735 ntBASIC17.48■□□□□ 0.39
CHI3L1P36222 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHI3L1P36222 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.47■□□□□ 0.39
CHI3L1P36222 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHI3L1P36222 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHI3L1P36222 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CHI3L1P36222 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.47■□□□□ 0.39
CHI3L1P36222 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.47■□□□□ 0.39
CHI3L1P36222 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHI3L1P36222 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHI3L1P36222 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHI3L1P36222 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHI3L1P36222 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.47■□□□□ 0.39
CHI3L1P36222 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHI3L1P36222 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHI3L1P36222 MESTP1-201ENST00000404287 994 ntBASIC17.47■□□□□ 0.39
CHI3L1P36222 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHI3L1P36222 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.47■□□□□ 0.39
CHI3L1P36222 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHI3L1P36222 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHI3L1P36222 MFAP1P1-201ENST00000442257 1255 ntBASIC17.47■□□□□ 0.39
CHI3L1P36222 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.47■□□□□ 0.39
CHI3L1P36222 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms