Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SDHAP2-201ENST00000455183 2001 ntBASIC19.85■□□□□ 0.77
CNTN3Q9P232 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 TSPY22P-201ENST00000427496 604 ntBASIC19.85■□□□□ 0.77
CNTN3Q9P232 TSSC2-201ENST00000450217 709 ntBASIC19.85■□□□□ 0.77
CNTN3Q9P232 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 AC005332.3-201ENST00000589904 676 ntBASIC19.85■□□□□ 0.77
CNTN3Q9P232 AL390719.2-201ENST00000606993 987 ntBASIC19.85■□□□□ 0.77
CNTN3Q9P232 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CNTN3Q9P232 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTN3Q9P232 CROCCP3-202ENST00000420820 1947 ntBASIC19.84■□□□□ 0.77
CNTN3Q9P232 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 Z83836.1-201ENST00000624605 1642 ntBASIC19.84■□□□□ 0.77
CNTN3Q9P232 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.84■□□□□ 0.77
CNTN3Q9P232 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTN3Q9P232 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.84■□□□□ 0.77
CNTN3Q9P232 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.83■□□□□ 0.77
CNTN3Q9P232 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTN3Q9P232 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTN3Q9P232 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.83■□□□□ 0.77
CNTN3Q9P232 IGHGP-201ENST00000390555 1178 ntBASIC19.83■□□□□ 0.77
CNTN3Q9P232 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.83■□□□□ 0.77
CNTN3Q9P232 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.83■□□□□ 0.77
CNTN3Q9P232 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTN3Q9P232 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTN3Q9P232 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTN3Q9P232 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTN3Q9P232 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTN3Q9P232 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.83■□□□□ 0.76
CNTN3Q9P232 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTN3Q9P232 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CNTN3Q9P232 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CNTN3Q9P232 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.82■□□□□ 0.76
CNTN3Q9P232 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CNTN3Q9P232 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 AP002383.4-201ENST00000442518 975 ntBASIC19.82■□□□□ 0.76
CNTN3Q9P232 HCG4P8-203ENST00000443049 980 ntBASIC19.82■□□□□ 0.76
CNTN3Q9P232 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 GPR32P1-201ENST00000601788 811 ntBASIC19.82■□□□□ 0.76
CNTN3Q9P232 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.82■□□□□ 0.76
CNTN3Q9P232 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTN3Q9P232 AC093503.3-201ENST00000624917 2352 ntBASIC19.81■□□□□ 0.76
CNTN3Q9P232 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms