Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC116562.2-201ENST00000507042 360 ntBASIC17.24■□□□□ 0.35
RLIMQ9NVW2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 AC233702.5-201ENST00000584107 538 ntBASIC17.24■□□□□ 0.35
RLIMQ9NVW2 Z99916.2-201ENST00000604037 246 ntBASIC17.24■□□□□ 0.35
RLIMQ9NVW2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 AL049637.2-201ENST00000641778 930 ntBASIC17.24■□□□□ 0.35
RLIMQ9NVW2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.24■□□□□ 0.35
RLIMQ9NVW2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RLIMQ9NVW2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 AC012618.2-201ENST00000428058 849 ntBASIC17.23■□□□□ 0.35
RLIMQ9NVW2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 SLC25A1P4-201ENST00000567977 778 ntBASIC17.23■□□□□ 0.35
RLIMQ9NVW2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 AC008622.2-201ENST00000617006 1229 ntBASIC17.23■□□□□ 0.35
RLIMQ9NVW2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 ESPNP-201ENST00000270691 2015 ntBASIC17.23■□□□□ 0.35
RLIMQ9NVW2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RLIMQ9NVW2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 AC008556.1-201ENST00000610908 2040 ntBASIC17.22■□□□□ 0.35
RLIMQ9NVW2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 REXO1L10P-201ENST00000615707 1290 ntBASIC17.22■□□□□ 0.35
RLIMQ9NVW2 REXO1L12P-201ENST00000622156 912 ntBASIC17.22■□□□□ 0.35
RLIMQ9NVW2 AC096733.2-201ENST00000609937 1394 ntBASIC17.22■□□□□ 0.35
RLIMQ9NVW2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RLIMQ9NVW2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RLIMQ9NVW2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms