Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 TMPOP1-202ENST00000424642 1267 ntBASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 AC034232.1-201ENST00000506026 1064 ntBASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 MIR3180-4-201ENST00000582223 153 ntBASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SDHAF3Q9NRP4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 RCN1P1-201ENST00000400413 996 ntBASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 FAM210CP-201ENST00000445714 574 ntBASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 KRT18P21-201ENST00000515767 1272 ntBASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 AC104390.1-201ENST00000555663 520 ntBASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SDHAF3Q9NRP4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SDHAF3Q9NRP4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SDHAF3Q9NRP4 CROCCP3-202ENST00000420820 1947 ntBASIC16.96■□□□□ 0.3
SDHAF3Q9NRP4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.96■□□□□ 0.3
SDHAF3Q9NRP4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.96■□□□□ 0.3
SDHAF3Q9NRP4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SDHAF3Q9NRP4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
SDHAF3Q9NRP4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SDHAF3Q9NRP4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 RNF152P1-201ENST00000397754 604 ntBASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 AK4P3-201ENST00000418260 669 ntBASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 LINC01238-205ENST00000567549 1107 ntBASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 RN7SL850P-201ENST00000579959 291 ntBASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 AC024243.1-201ENST00000609234 778 ntBASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDHAF3Q9NRP4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDHAF3Q9NRP4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SDHAF3Q9NRP4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDHAF3Q9NRP4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SDHAF3Q9NRP4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
SDHAF3Q9NRP4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.94■□□□□ 0.3
SDHAF3Q9NRP4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDHAF3Q9NRP4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SDHAF3Q9NRP4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms