Protein–RNA interactions for Protein: Q99675

CGRRF1, Cell growth regulator with RING finger domain protein 1, humanhuman

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1Q99675 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.9■□□□□ 0.78
CGRRF1Q99675 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGRRF1Q99675 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGRRF1Q99675 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGRRF1Q99675 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.9■□□□□ 0.78
CGRRF1Q99675 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CGRRF1Q99675 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
CGRRF1Q99675 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CGRRF1Q99675 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CGRRF1Q99675 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CGRRF1Q99675 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CGRRF1Q99675 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGRRF1Q99675 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 LINC01238-205ENST00000567549 1107 ntBASIC19.88■□□□□ 0.77
CGRRF1Q99675 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CGRRF1Q99675 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CGRRF1Q99675 AC009113.1-201ENST00000570267 2443 ntBASIC19.87■□□□□ 0.77
CGRRF1Q99675 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 AC112907.2-201ENST00000448639 330 ntBASIC19.87■□□□□ 0.77
CGRRF1Q99675 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 AC092597.1-201ENST00000487352 616 ntBASIC19.87■□□□□ 0.77
CGRRF1Q99675 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.87■□□□□ 0.77
CGRRF1Q99675 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CGRRF1Q99675 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CGRRF1Q99675 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CGRRF1Q99675 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms