Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.75■□□□□ 0.439e-6■□□□□ 8.7
LSM11P83369 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.412e-7■□□□□ 8.7
LSM11P83369 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.399e-6■□□□□ 8.7
LSM11P83369 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.362e-7■□□□□ 8.7
LSM11P83369 AC026954.2-201ENST00000315601 2349 ntAPPRIS ALT2 TSL 216.98■□□□□ 0.319e-6■□□□□ 8.7
LSM11P83369 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.94■□□□□ 0.32e-7■□□□□ 8.7
LSM11P83369 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.229e-6■□□□□ 8.7
LSM11P83369 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.189e-6■□□□□ 8.7
LSM11P83369 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.189e-6■□□□□ 8.7
LSM11P83369 TMEM161A-209ENST00000587985 1754 ntTSL 516.12■□□□□ 0.179e-6■□□□□ 8.7
LSM11P83369 TMEM161A-205ENST00000587406 1923 ntTSL 515.51■□□□□ 0.079e-6■□□□□ 8.7
LSM11P83369 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.079e-6■□□□□ 8.7
LSM11P83369 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.069e-6■□□□□ 8.7
LSM11P83369 TMEM161A-210ENST00000589448 1799 ntTSL 515.39■□□□□ 0.059e-6■□□□□ 8.7
LSM11P83369 ZXDC-204ENST00000515545 2635 ntTSL 1 (best)15.28■□□□□ 0.049e-6■□□□□ 8.7
LSM11P83369 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.039e-6■□□□□ 8.7
LSM11P83369 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.019e-6■□□□□ 8.7
LSM11P83369 MFSD10-204ENST00000507272 1575 ntTSL 514.94□□□□□ -0.022e-7■□□□□ 8.7
LSM11P83369 ARL6IP4-212ENST00000456762 796 ntAPPRIS ALT2 TSL 214.75□□□□□ -0.053e-9■□□□□ 8.7
LSM11P83369 TMEM161A-213ENST00000591443 657 ntTSL 214.75□□□□□ -0.059e-6■□□□□ 8.7
LSM11P83369 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.72□□□□□ -0.052e-7■□□□□ 8.7
LSM11P83369 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.59□□□□□ -0.079e-6■□□□□ 8.7
LSM11P83369 SEPT9-221ENST00000588958 879 ntTSL 214.59□□□□□ -0.079e-6■□□□□ 8.7
LSM11P83369 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.19e-6■□□□□ 8.7
LSM11P83369 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.15□□□□□ -0.149e-6■□□□□ 8.7
LSM11P83369 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.11□□□□□ -0.159e-6■□□□□ 8.7
LSM11P83369 ARHGEF1-211ENST00000595723 872 ntTSL 513.87□□□□□ -0.199e-6■□□□□ 8.7
LSM11P83369 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.253e-9■□□□□ 8.7
LSM11P83369 SEPT9-210ENST00000585929 906 ntTSL 413.27□□□□□ -0.299e-6■□□□□ 8.7
LSM11P83369 TSTA3-216ENST00000533817 871 ntTSL 313.12□□□□□ -0.319e-6■□□□□ 8.7
LSM11P83369 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.319e-6■□□□□ 8.7
LSM11P83369 SGSH-210ENST00000573150 2612 ntTSL 213.07□□□□□ -0.329e-6■□□□□ 8.7
LSM11P83369 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13□□□□□ -0.339e-6■□□□□ 8.7
LSM11P83369 ZXDC-203ENST00000514463 4639 ntTSL 1 (best)12.71□□□□□ -0.379e-6■□□□□ 8.7
LSM11P83369 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.71□□□□□ -0.379e-6■□□□□ 8.7
LSM11P83369 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.67□□□□□ -0.389e-6■□□□□ 8.7
LSM11P83369 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.48□□□□□ -0.412e-7■□□□□ 8.7
LSM11P83369 SGSH-213ENST00000575282 5562 ntTSL 1 (best)12.47□□□□□ -0.419e-6■□□□□ 8.7
LSM11P83369 SEPT9-212ENST00000586128 752 ntTSL 412.43□□□□□ -0.429e-6■□□□□ 8.7
LSM11P83369 TSTA3-209ENST00000529048 869 ntTSL 512.3□□□□□ -0.449e-6■□□□□ 8.7
LSM11P83369 TSTA3-212ENST00000530474 823 ntTSL 511.76□□□□□ -0.539e-6■□□□□ 8.7
LSM11P83369 ARHGEF1-222ENST00000600517 428 ntTSL 311.76□□□□□ -0.539e-6■□□□□ 8.7
LSM11P83369 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.569e-6■□□□□ 8.7
LSM11P83369 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.572e-7■□□□□ 8.7
LSM11P83369 TSTA3-210ENST00000529064 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.579e-6■□□□□ 8.7
LSM11P83369 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.579e-6■□□□□ 8.7
LSM11P83369 MTHFD1-208ENST00000554739 688 ntTSL 311.39□□□□□ -0.599e-6■□□□□ 8.7
LSM11P83369 MTHFD1-209ENST00000554768 563 ntTSL 411.39□□□□□ -0.599e-6■□□□□ 8.7
LSM11P83369 SUPT7L-204ENST00000406540 2869 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.649e-6■□□□□ 8.7
LSM11P83369 GSTK1-204ENST00000442394 2219 ntTSL 511.04□□□□□ -0.642e-7■□□□□ 8.7
LSM11P83369 SEPT9-213ENST00000586433 569 ntTSL 410.92□□□□□ -0.669e-6■□□□□ 8.7
LSM11P83369 SGSH-214ENST00000575484 565 ntTSL 310.78□□□□□ -0.689e-6■□□□□ 8.7
LSM11P83369 MTHFD1-211ENST00000555709 803 ntTSL 210.56□□□□□ -0.729e-6■□□□□ 8.7
LSM11P83369 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC10.32□□□□□ -0.762e-7■□□□□ 8.7
LSM11P83369 HADHA-201ENST00000380649 3037 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.779e-6■□□□□ 8.7
LSM11P83369 SEPT9-239ENST00000591704 749 ntTSL 210.22□□□□□ -0.779e-6■□□□□ 8.7
LSM11P83369 NEURL4-209ENST00000573186 4431 ntTSL 510.2□□□□□ -0.789e-6■□□□□ 8.7
LSM11P83369 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC10.05□□□□□ -0.89e-6■□□□□ 8.7
LSM11P83369 RNF43-203ENST00000577716 4367 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.829e-6■□□□□ 8.7
LSM11P83369 MTHFD1-210ENST00000555252 2053 ntTSL 1 (best)9.89□□□□□ -0.839e-6■□□□□ 8.7
LSM11P83369 SGSH-209ENST00000572257 581 ntTSL 49.59□□□□□ -0.879e-6■□□□□ 8.7
LSM11P83369 ARL6IP4-202ENST00000357866 546 ntTSL 1 (best) BASIC9.46□□□□□ -0.93e-9■□□□□ 8.7
LSM11P83369 SGSH-206ENST00000571156 554 ntTSL 49.45□□□□□ -0.99e-6■□□□□ 8.7
LSM11P83369 DKK1-204ENST00000494277 465 ntTSL 59.27□□□□□ -0.939e-6■□□□□ 8.7
LSM11P83369 SEPT9-234ENST00000590938 611 ntTSL 49.02□□□□□ -0.979e-6■□□□□ 8.7
LSM11P83369 HADHA-204ENST00000492433 752 ntTSL 28.9□□□□□ -0.989e-6■□□□□ 8.7
LSM11P83369 GSTK1-206ENST00000473649 2692 ntTSL 28.3□□□□□ -1.082e-7■□□□□ 8.7
LSM11P83369 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.099e-6■□□□□ 8.7
LSM11P83369 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.159e-6■□□□□ 8.7
LSM11P83369 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC7.83□□□□□ -1.169e-6■□□□□ 8.7
LSM11P83369 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.269e-6■□□□□ 8.7
LSM11P83369 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.46□□□□□ -1.379e-6■□□□□ 8.7
LSM11P83369 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.51□□□□□ -0.254e-7■□□□□ 8.7
LSM11P83369 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.02□□□□□ -0.334e-7■□□□□ 8.7
LSM11P83369 AC133540.1-201ENST00000620845 1019 ntBASIC12.93□□□□□ -0.344e-7■□□□□ 8.7
LSM11P83369 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.182e-6■□□□□ 8.7
LSM11P83369 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.68□□□□□ -0.222e-6■□□□□ 8.7
LSM11P83369 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.282e-6■□□□□ 8.7
LSM11P83369 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.16□□□□□ -0.32e-6■□□□□ 8.7
LSM11P83369 LRRFIP1-210ENST00000474195 1957 ntTSL 213.13□□□□□ -0.312e-6■□□□□ 8.7
LSM11P83369 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.432e-6■□□□□ 8.7
LSM11P83369 LRRFIP1-206ENST00000464608 564 ntTSL 311.39□□□□□ -0.592e-6■□□□□ 8.7
LSM11P83369 UBR4-213ENST00000483922 543 ntTSL 511.33□□□□□ -0.62e-6■□□□□ 8.7
LSM11P83369 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC11.13□□□□□ -0.632e-6■□□□□ 8.7
LSM11P83369 UBR4-211ENST00000467272 891 ntTSL 510.71□□□□□ -0.692e-6■□□□□ 8.7
LSM11P83369 MAP4-208ENST00000429422 3724 ntTSL 1 (best)10.45□□□□□ -0.742e-6■□□□□ 8.7
LSM11P83369 LRRFIP1-211ENST00000478958 2869 ntTSL 1 (best)10.44□□□□□ -0.742e-6■□□□□ 8.7
LSM11P83369 LRRFIP1-214ENST00000489603 531 ntTSL 39.98□□□□□ -0.812e-6■□□□□ 8.7
LSM11P83369 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC9.47□□□□□ -0.892e-6■□□□□ 8.7
LSM11P83369 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.92e-6■□□□□ 8.7
LSM11P83369 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC8.34□□□□□ -1.072e-6■□□□□ 8.7
LSM11P83369 SF3B2-216ENST00000534765 3932 ntTSL 28.3□□□□□ -1.082e-6■□□□□ 8.7
LSM11P83369 SF3B2-210ENST00000530981 1080 ntTSL 58.21□□□□□ -1.12e-6■□□□□ 8.7
LSM11P83369 PRODH2-205ENST00000589835 612 ntTSL 57.83□□□□□ -1.162e-6■□□□□ 8.7
LSM11P83369 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.56e-6■□□□□ 8.7
LSM11P83369 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.38■■□□□ 1.332e-8■□□□□ 8.7
LSM11P83369 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.86e-6■□□□□ 8.7
LSM11P83369 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.51■□□□□ 0.712e-8■□□□□ 8.7
LSM11P83369 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.72■□□□□ 0.592e-8■□□□□ 8.7
LSM11P83369 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.156e-6■□□□□ 8.7
Retrieved 100 of 11,495 protein–RNA pairs in 580.8 ms