Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
YBX1P67809 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.03■□□□□ 0.48
YBX1P67809 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.03■□□□□ 0.48
YBX1P67809 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
YBX1P67809 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.03■□□□□ 0.48
YBX1P67809 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
YBX1P67809 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YBX1P67809 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
YBX1P67809 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
YBX1P67809 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YBX1P67809 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
YBX1P67809 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YBX1P67809 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.02■□□□□ 0.48
YBX1P67809 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
YBX1P67809 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.02■□□□□ 0.48
YBX1P67809 AL137013.1-201ENST00000432946 1228 ntBASIC18.02■□□□□ 0.48
YBX1P67809 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
YBX1P67809 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.02■□□□□ 0.48
YBX1P67809 RN7SL850P-201ENST00000579959 291 ntBASIC18.02■□□□□ 0.48
YBX1P67809 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
YBX1P67809 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YBX1P67809 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.02■□□□□ 0.48
YBX1P67809 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
YBX1P67809 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.02■□□□□ 0.48
YBX1P67809 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
YBX1P67809 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
YBX1P67809 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
YBX1P67809 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.02■□□□□ 0.47
YBX1P67809 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
YBX1P67809 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
YBX1P67809 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
YBX1P67809 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
YBX1P67809 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
YBX1P67809 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
YBX1P67809 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.01■□□□□ 0.47
YBX1P67809 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.01■□□□□ 0.47
YBX1P67809 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.01■□□□□ 0.47
YBX1P67809 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.01■□□□□ 0.47
YBX1P67809 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.01■□□□□ 0.47
YBX1P67809 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
YBX1P67809 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.01■□□□□ 0.47
YBX1P67809 AC009947.2-201ENST00000444014 672 ntBASIC18.01■□□□□ 0.47
YBX1P67809 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.01■□□□□ 0.47
YBX1P67809 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.01■□□□□ 0.47
YBX1P67809 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.01■□□□□ 0.47
YBX1P67809 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.01■□□□□ 0.47
YBX1P67809 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.01■□□□□ 0.47
YBX1P67809 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.01■□□□□ 0.47
YBX1P67809 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
YBX1P67809 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.01■□□□□ 0.47
YBX1P67809 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
YBX1P67809 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
YBX1P67809 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
YBX1P67809 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.01■□□□□ 0.47
YBX1P67809 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YBX1P67809 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18■□□□□ 0.47
YBX1P67809 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
YBX1P67809 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
YBX1P67809 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18■□□□□ 0.47
YBX1P67809 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18■□□□□ 0.47
YBX1P67809 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YBX1P67809 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18■□□□□ 0.47
YBX1P67809 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YBX1P67809 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
YBX1P67809 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YBX1P67809 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18■□□□□ 0.47
YBX1P67809 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18■□□□□ 0.47
YBX1P67809 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
YBX1P67809 MIR3180-5-201ENST00000583743 153 ntBASIC18■□□□□ 0.47
YBX1P67809 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18■□□□□ 0.47
YBX1P67809 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
YBX1P67809 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18■□□□□ 0.47
YBX1P67809 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18■□□□□ 0.47
YBX1P67809 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YBX1P67809 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
YBX1P67809 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms