Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE3O75131 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CPNE3O75131 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE3O75131 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE3O75131 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CPNE3O75131 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE3O75131 AL645929.1-201ENST00000420084 975 ntBASIC17.73■□□□□ 0.43
CPNE3O75131 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE3O75131 SEC1P-202ENST00000473944 940 ntBASIC17.73■□□□□ 0.43
CPNE3O75131 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE3O75131 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE3O75131 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE3O75131 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE3O75131 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE3O75131 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE3O75131 KRT8P7-201ENST00000533003 1432 ntBASIC17.72■□□□□ 0.43
CPNE3O75131 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE3O75131 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CPNE3O75131 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CPNE3O75131 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE3O75131 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE3O75131 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE3O75131 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CPNE3O75131 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CPNE3O75131 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE3O75131 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
CPNE3O75131 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE3O75131 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 IRX1P1-201ENST00000438849 1838 ntBASIC17.72■□□□□ 0.43
CPNE3O75131 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.72■□□□□ 0.43
CPNE3O75131 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE3O75131 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 AC007613.1-201ENST00000572811 2597 ntBASIC17.72■□□□□ 0.43
CPNE3O75131 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE3O75131 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.72■□□□□ 0.43
CPNE3O75131 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE3O75131 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CPNE3O75131 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
CPNE3O75131 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.71■□□□□ 0.43
CPNE3O75131 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CPNE3O75131 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CPNE3O75131 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
CPNE3O75131 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CPNE3O75131 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
CPNE3O75131 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.71■□□□□ 0.43
CPNE3O75131 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE3O75131 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 HCG4P8-203ENST00000443049 980 ntBASIC17.71■□□□□ 0.43
CPNE3O75131 SPDYE13P-201ENST00000445314 798 ntBASIC17.71■□□□□ 0.43
CPNE3O75131 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.71■□□□□ 0.43
CPNE3O75131 AC092597.1-201ENST00000487352 616 ntBASIC17.71■□□□□ 0.43
CPNE3O75131 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CPNE3O75131 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CPNE3O75131 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE3O75131 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CPNE3O75131 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CPNE3O75131 AC008556.1-201ENST00000610908 2040 ntBASIC17.71■□□□□ 0.42
CPNE3O75131 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPNE3O75131 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.71■□□□□ 0.42
CPNE3O75131 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms