Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.55■□□□□ 0.24
PFDN1O60925 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.55■□□□□ 0.24
PFDN1O60925 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.55■□□□□ 0.24
PFDN1O60925 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.55■□□□□ 0.24
PFDN1O60925 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PFDN1O60925 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PFDN1O60925 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PFDN1O60925 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 AC010141.3-201ENST00000456659 717 ntBASIC16.55■□□□□ 0.24
PFDN1O60925 MIR6722-201ENST00000617286 78 ntBASIC16.55■□□□□ 0.24
PFDN1O60925 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PFDN1O60925 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PFDN1O60925 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.55■□□□□ 0.24
PFDN1O60925 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
PFDN1O60925 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.55■□□□□ 0.24
PFDN1O60925 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
PFDN1O60925 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.55■□□□□ 0.24
PFDN1O60925 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PFDN1O60925 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PFDN1O60925 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PFDN1O60925 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.54■□□□□ 0.24
PFDN1O60925 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.54■□□□□ 0.24
PFDN1O60925 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
PFDN1O60925 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.54■□□□□ 0.24
PFDN1O60925 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.54■□□□□ 0.24
PFDN1O60925 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PFDN1O60925 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.54■□□□□ 0.24
PFDN1O60925 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.54■□□□□ 0.24
PFDN1O60925 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN1O60925 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.54■□□□□ 0.24
PFDN1O60925 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.53■□□□□ 0.24
PFDN1O60925 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.53■□□□□ 0.24
PFDN1O60925 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.53■□□□□ 0.24
PFDN1O60925 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.53■□□□□ 0.24
PFDN1O60925 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.53■□□□□ 0.24
PFDN1O60925 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.53■□□□□ 0.24
PFDN1O60925 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PFDN1O60925 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.53■□□□□ 0.24
PFDN1O60925 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN1O60925 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.53■□□□□ 0.24
PFDN1O60925 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.52■□□□□ 0.24
PFDN1O60925 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.52■□□□□ 0.24
PFDN1O60925 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
PFDN1O60925 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms